Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte3g00848 ATGGATTGCAACAAGGAAGAGGCCTCAAGGGCCAAGTATATTGCCCAACAGAAAATGCAATTGAAAGATTTTGCAGGGGCTCGCAAATTGGCTGTCAAGGCTCAAAAACTGTATCCTGATTTGGAGAATGTGACTCAGATGATTACAGTTTGTGATGTACATTGCTTTGCTGAGCAGAAATTATATTCTAATGAGATGGATTGGTACCGAATTCTTCAAGTTGAGCCAGCAGCAGATGAGGCAACCATTAAAAAACAGTACAGAAAGTTTGCTCTCCAACTTCATCCTGATAAGAATGGGTTTCCTGGCGCTGAAGCTGCTTTTAAGTTGATTGGGGAAGCTCAAAGAGTACTTCTAGATCACCAAAAACGGTATTTGCATGATATGAAACGTAAAGTTCCTACAAGTAGACCTACAGTGCCTCCTCGTCCATCTCAGAAGGCGAAGAAAGGTGTGAGTGCTGGGCCCCAAATGAATACAAGAGGTGGTAATACGTACTTCAATCCTCAGTACCATCAAAGCCGTGATTCTTGGTCTGCAACTGCACAGCAGGGTTTCAATGGTGTAGATCCTACTTTTTGGACTGTCTGTATATACTGTTTTGTTAGGTTCCAGTATTACAGGTCAATGCTAAATAAAACTGTTCCTTGTCAAAATTGCAATAAGACCTTCAAGGCCAGTGAATTGAAAGAAGCACCAGCACCAGCACCAGCAACTAAACAAAGTCAGGAAGCGTTCCCCAAGAAGAATGATTTTAGTCAAGGAACTTTCAAAGTGGACTCTGAATGTAAGGCCGATGTGAGTGCTAAGAAACCGGAAACAGACAATCAGAAAGCAGGGTTCCAATCTAATACTGGTTGTGAAAAACAAAATGGGAAAAGAAAGAGGAAAGGGAAATCAGAATCAAGTGAAAGTTCTGTCACTGTTGACAGCTCAGAGTCAGAAGAAGATGTTGAAGTTGATTGTTTCAATGTCAGGAATAGTTTTGTAAGCTCTGCGGAGAATCGACGGACGTCTTCACGAAAGAAGCAACAGGTTTCATATAAAGAAAATTTGAGTGATGATGATGATGGTCTACCAGTTCCATCTAAAAGGCATAAGAACGCTGGATCTCCAGTTTCTGGTATAGCTGTTGAGGAAGATCAGGAAGAGGCCAAATCAAAACAACATTCTCATCTTCAAAAGAACTCATCGAAGAAAAGTAATGGGTCTGGTGATGAGAGACAAAATGTTGAAGTTGGAGAGGACAACAGCGAGACTTATTTCAAAGCTCACGATAGCAGTAAAAAAGGTTCAACCTCTAAAGCTGCATCACCGCCAGAAACTTATGTGTGTCCTGATCCAGAATTCAGTGACTTTGATATTCAAGAGGAATCTTTTGCTGCTGGGCAGATTTGGGCACTTTTTGATCCTCTTGATGCCATGCCTAGATTCTATGGTCGGATCACGGAAGTTATTTCTTCTGAATTCGAGGTGCATTTTATGTGGCTTGAACCTGATCCTGATGAGGAGGATAAACAGAATTGGGTAGAGAATGATTTACCCATATCTTGTGGCAAGTATAAGCTTGGGAAGTTTGAAACTACTAATGGCATTGAGATGTTTTCTCATTTGGTATCATGGGAAAAAGGTGCACGGAGAAATTCTTTCAAAGTACATCCGAGAAAGGGAGAGACTTGGGCTCTTTTTAAAAATTGGGATATTATGTGGTACATAGATGCAGATGCTCACCAGTCGTTTGAGTATGAGTTTGTTGAAATTGTGTCTGATTATGTTGAGGGTGAGGGTGTACGTGTTGCTCACTTGGGAAAGTTGAAAGGCTTTGTGAGTCTTTTTTCCCGAGTGTTGAAGAATGGTGTTGAAACTTACCAAGTTCCAGTTGCAGAATTTTTAAGGTTCTCTCACAGGGTCCCTTCCTTTCAAATGACTGGTGATGAAAGAGATGGGGTGCCTAAAGGATCTTATGAGCTTGATCCTGCATGCTTGCCAAAAAAGGTTGAAGAGATTTCTCTTCCTGAAAATTTGGACGTTTTGTTTGGCAGCACCCAACTTACTAGTAAAATTCCACGATCTTCACCTCGGTTGAGGAGCACCAAGAAGTCTGATGGCAGTGCATCTACTGTGGATGACTTTGGTGCAGAAGGGAGCAATCTAAGGCACGGAAGCAATAGAGACTCTGTCCTTATTGACGTTGAACAGAGCCCCTCAAAGCCCAAGAGCAAGGATTTGACTCCGAAGAAAAGGGAGACCAGAAGTTCTACTCTGCAGGATAAGAAATTCAAGGGTTTGGGCTCTTCTACATCTGCGAATGCTGATGCACCTTTAATTCGAGATCCTCAGTTCCACGATTTTGCTGCTCCCAAGTCTGAAGAAAATTTTAGAAGAGGCCAAATCTGGGCAGTCTATTGTGATGAGGATGGCTTGCCAAAGAATTACTGTCAAATCAAGAAAGTAGATTCTCATCCAAAGTTTAAAATGCATGTTATTTGTCTTTCGGGTTCTTCTCCACCAAATATAATTGTATGGGACGATACAAAGATGCTTGTGTCTTGTGGGACATTCAAGGTTCGAAAGGCTGAAGGCAGAGAATATACGAGCACGGGATCCTTTTCACATCAGGTTCAGGCAGTTCTTAAAAGGAACGAACATCATATTGTCCCAAAGAAAGGAGAAATTTGGGCTCTATACAAGAACTGGACACCAAAATTCACAATTGCTGACCTGAAAAATGCTCAATATGAGATAGTGGAAGTACTTGGGGAAAATGGTCAAGAGGTAGATGTTTTAGTCCTGAAACTCGTGAAGGATAGTGTTCCAGTTTTCAAAAGTGAAATAGAAAATGGTTTTGCCGTTACCAGGAAAATCTCTCGTACTGAACTGTATAGGTTTTCCCATCAAATTCCTGCTTTCAAGTTGACCAAAGAGCATGATAGCAGTATGATAGGCTTCTGGGAACTTGACACACGAGCGATGCCCTTTCACTTTTTTCGCACGAGTTGA 3000 0.416 MDCNKEEASRAKYIAQQKMQLKDFAGARKLAVKAQKLYPDLENVTQMITVCDVHCFAEQKLYSNEMDWYRILQVEPAADEATIKKQYRKFALQLHPDKNGFPGAEAAFKLIGEAQRVLLDHQKRYLHDMKRKVPTSRPTVPPRPSQKAKKGVSAGPQMNTRGGNTYFNPQYHQSRDSWSATAQQGFNGVDPTFWTVCIYCFVRFQYYRSMLNKTVPCQNCNKTFKASELKEAPAPAPATKQSQEAFPKKNDFSQGTFKVDSECKADVSAKKPETDNQKAGFQSNTGCEKQNGKRKRKGKSESSESSVTVDSSESEEDVEVDCFNVRNSFVSSAENRRTSSRKKQQVSYKENLSDDDDGLPVPSKRHKNAGSPVSGIAVEEDQEEAKSKQHSHLQKNSSKKSNGSGDERQNVEVGEDNSETYFKAHDSSKKGSTSKAASPPETYVCPDPEFSDFDIQEESFAAGQIWALFDPLDAMPRFYGRITEVISSEFEVHFMWLEPDPDEEDKQNWVENDLPISCGKYKLGKFETTNGIEMFSHLVSWEKGARRNSFKVHPRKGETWALFKNWDIMWYIDADAHQSFEYEFVEIVSDYVEGEGVRVAHLGKLKGFVSLFSRVLKNGVETYQVPVAEFLRFSHRVPSFQMTGDERDGVPKGSYELDPACLPKKVEEISLPENLDVLFGSTQLTSKIPRSSPRLRSTKKSDGSASTVDDFGAEGSNLRHGSNRDSVLIDVEQSPSKPKSKDLTPKKRETRSSTLQDKKFKGLGSSTSANADAPLIRDPQFHDFAAPKSEENFRRGQIWAVYCDEDGLPKNYCQIKKVDSHPKFKMHVICLSGSSPPNIIVWDDTKMLVSCGTFKVRKAEGREYTSTGSFSHQVQAVLKRNEHHIVPKKGEIWALYKNWTPKFTIADLKNAQYEIVEVLGENGQEVDVLVLKLVKDSVPVFKSEIENGFAVTRKISRTELYRFSHQIPAFKLTKEHDSSMIGFWELDTRAMPFHFFRTS* 1000
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte3g00848 999 Gene3D DnaJ domain 64 188 IPR036869 -
Pte3g00848 999 MobiDBLite consensus disorder prediction 336 363 - -
Pte3g00848 999 SMART dnaj_3 66 123 IPR001623 -
Pte3g00848 999 MobiDBLite consensus disorder prediction 332 445 - -
Pte3g00848 999 MobiDBLite consensus disorder prediction 757 773 - -
Pte3g00848 999 MobiDBLite consensus disorder prediction 401 430 - -
Pte3g00848 999 Pfam DnaJ domain 67 128 IPR001623 -
Pte3g00848 999 SUPERFAMILY Chaperone J-domain 60 132 IPR036869 -
Pte3g00848 999 MobiDBLite consensus disorder prediction 289 303 - -
Pte3g00848 999 MobiDBLite consensus disorder prediction 687 775 - -
Pte3g00848 999 MobiDBLite consensus disorder prediction 131 163 - -
Pte3g00848 999 PRINTS DnaJ domain signature 87 102 IPR001623 -
Pte3g00848 999 PRINTS DnaJ domain signature 69 87 IPR001623 -
Pte3g00848 999 PRINTS DnaJ domain signature 103 123 IPR001623 -
Pte3g00848 999 ProSiteProfiles dnaJ domain profile. 67 131 IPR001623 -
Pte3g00848 999 CDD DnaJ 67 120 IPR001623 -
Pte3g00848 999 PANTHER DNAJ HEAT SHOCK AMINO-TERMINAL DOMAIN PROTEIN-RELATED 1 992 - -
Pte3g00848 999 MobiDBLite consensus disorder prediction 266 318 - -
Pte3g00848 999 MobiDBLite consensus disorder prediction 735 756 - -
Pte3g00848 999 MobiDBLite consensus disorder prediction 230 253 - -
Pte3g00848 999 Pfam Domain of unknown function (DUF3444) 776 975 IPR024593 -
Pte3g00848 999 Pfam Domain of unknown function (DUF3444) 441 646 IPR024593 -
Pte3g00848 999 MobiDBLite consensus disorder prediction 687 705 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte3g00848 Pte-Chr3 6916154 6920920 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte3g00848 4 238 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT2G01710 30.417 6.98e-25 105
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte3g00848 - - qsa:O6P43_003497 901.353