Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte3g00841 ATGTTGTCAACAACGATGACCTCTGATGAATATATTGAAGTGGTAAAAATGAACATTTTTGTAGCTCTGCTTTGTGCTTGCATTATAATCGGCCATTTACTCGAGGAAAATCGATGGATCAATGAGTCCATTACAGCATTAGTTATTGGTGTCTGCACTGGGGGTGTCATAATGCTTATAACGAAAGGCAAAAGATTACAAATTTTGTCTTTTAGTGAAGATCTTTTCTTCATTTATCTTCTACCTCCAATCATTTTCAATGCCGGGTTTCAAGTCAAGAAGAAGCAATTCTTCCGCAATTTCATGAATATCATCCTGTTTGGTGCAGTTGGGACTTTGATATCATTTTGCATCGTATCACTAGGTGCGGCACTTATTTTCAAGAAAATGAATATCACAGGATCCCTCAAACTCGGAGACTTTCTTGCAATTGGAGCAATATTCTCTGCTACAGATTCTGTGTGCACCTTGCAGGTTCTTAATCAGGATGAAACACCTTTGCTGTACAGCCTGGTCTTCGGGGAAGGTGTTGTAAATGATGCGACATCTGTTGTGCTTTTCAATGCAATTCAGGGATTTGACGTCCATCACATGAACTGGAGCATCGGCTTGGATTTAGTCGGAAACTTTTTCTATCTATTTATTGCAAGCACCGCCCTTGGAGTTATTTCTGGACTGTTAAGCGCCTTCATCATAAAAAAGCTTTACTTCGGCAGGCACTCCACTGATCGTGAAGTTGCTCTTATGATACTCATGGCATACTTGTCATATGTTCTAGCAGAAGTATTAGCTTTGAGCAGCATTCTTACTGTATTCTTTTGTGGCATTGTCATGTCTCATTACACATGGCACAATGTCACTGAGAGTTCAAGAGTGACAACCAAGCATACCTTTGCTACCATGTCATTTGTTGCTGAGACATTTATCTTCCTTTACGTTGGCATGGATGCACTGGACAAAGACAAGTGGAAGGCTGTCAGTGGGAGCCTTGGAACATCGATCGCGGTGAGCTCAACAATTATGGGACTAGTTATGATTGGAAGGGCAGCCTTTGTTTTCCCTTTGTCGTACTTATCCAACTTGACCAAGACATCAGAAGATGTAAAAATTGAATTCAAGCAACAAGTAACAATCTGGTGGTCTGGACTTATGCGCGGAGCTGTCTCCATGGCACTTGCTTATAACCAGGTAAATAATTACAAGTCTATAACGACTGATGTGCATGACAGTGCACTCGTGATTACAAGTACAATCACAGTAGTTCTCTTCAGTACTTTCGTCTTTGGCTTAATGACAAAGCCACTTATAAGAATTTTGCTTCCTCCTTCAAAAAACATTATCATACTAAATTCCCCACCAGTTACTCCTAAATCATCGATTGATGCTGAGCCACTTCTGGGTAATGGAAGTGATTCACCTGCAAGTGATCCCATGCTCCGTCCAAGTAGCCTCCGGATTTTACTCAGTATTCCTACACAAGGTGTTCATAGACATTGGAGAAGGTTTGATGATGCTGTCATGCGACCTATCTTCGGAGGAAGGGGTTTTGTGCCTTACGCTCCAGGGTCGCCTCTTGAGCAAAGTGTTCACCAATGGCAATGA 1602 0.4151 MLSTTMTSDEYIEVVKMNIFVALLCACIIIGHLLEENRWINESITALVIGVCTGGVIMLITKGKRLQILSFSEDLFFIYLLPPIIFNAGFQVKKKQFFRNFMNIILFGAVGTLISFCIVSLGAALIFKKMNITGSLKLGDFLAIGAIFSATDSVCTLQVLNQDETPLLYSLVFGEGVVNDATSVVLFNAIQGFDVHHMNWSIGLDLVGNFFYLFIASTALGVISGLLSAFIIKKLYFGRHSTDREVALMILMAYLSYVLAEVLALSSILTVFFCGIVMSHYTWHNVTESSRVTTKHTFATMSFVAETFIFLYVGMDALDKDKWKAVSGSLGTSIAVSSTIMGLVMIGRAAFVFPLSYLSNLTKTSEDVKIEFKQQVTIWWSGLMRGAVSMALAYNQVNNYKSITTDVHDSALVITSTITVVLFSTFVFGLMTKPLIRILLPPSKNIIILNSPPVTPKSSIDAEPLLGNGSDSPASDPMLRPSSLRILLSIPTQGVHRHWRRFDDAVMRPIFGGRGFVPYAPGSPLEQSVHQWQ* 534
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte3g00841 533 Gene3D - 137 189 - -
Pte3g00841 533 Pfam Sodium/hydrogen exchanger family 20 436 IPR006153 GO:0006812|GO:0015297|GO:0016020|GO:0055085|GO:1902600
Pte3g00841 533 PRINTS Na+/H+ exchanger signature 75 86 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016020|GO:0055085
Pte3g00841 533 PRINTS Na+/H+ exchanger signature 104 112 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016020|GO:0055085
Pte3g00841 533 PRINTS Na+/H+ exchanger signature 89 103 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016020|GO:0055085
Pte3g00841 533 PRINTS Na+/H+ exchanger signature 145 155 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016020|GO:0055085
Pte3g00841 533 PANTHER SODIUM/HYDROGEN EXCHANGER 7 511 IPR018422 GO:0006812|GO:0015385|GO:0016020|GO:1902600
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte3g00841 Pte-Chr3 6846224 6850232 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte3g00841 5 531 Antiporters AT3G05030 67.718 0.0 731
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte3g00841 - - gmx:100791224 759.599
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte3g00841 3 6846224 6850232 Pte3g00841 3 6846224 6850232 RCT
Pte3g00841 3 6846224 6850232 Pte2g01954 2 39804421 39809862 RCT