Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte3g00835 ATGGGTTGTGTGTTTGGAAAGCAGACATCAGCTAAGTCAGTTGGACAGACTGTGGTAGAGACAGAAAGAGTTAAGGAAGAGAGGAAAAATGAAGTTAGGGCTGCAAGAGCTGAAGTGGTTGAGGTTCCAAACGGTGGGAATCGTAAGGAGGTTGGAGAGGAGAAGAGTGCAAAGCCAAGAGGAGAGAGGAGGAGATCTTCAAAGCCAAATCCCAGATTGAGTAACCCGCCTAACCATGTGCACGGTGAACAAGTGGCAGCTGGGTGGCCCTCTTGGCTCTCAAAGGTTGCTGGGGAAGCTATAAACGGTTTAACACCCAGAAGGGCAGATTCATTTGAGAAGCTTGATAAGATTGGACAAGGTACATATAGTAATGTATACAAAGCTAAGGATACGGTGACAGGGAAAATTGTTGCCCTGAAAAAGGTCCGGTTTGACAATTTGGAGCCCGAAAGTGTGAAATTCATGGCAAGAGAAATTCTCATTTTACGCCGTCTGGATCATCCCAATGTGGTCAAATTGGAGGGTTTAGTGACATCAAGAATGTCATGCAGTTTATATCTTGTTTTTCAATACATGGAGCATGATTTGGCTGGACTTGCCACAAATCCAGCAATTAAGTTCACAGAATCTCAGGTTAAATGTTATATGCATCAGCTTTTTTCTGGTCTAGAACACTGCCATAATCGTCATGTGCTGCATCGTGATATAAAGGGTTCAAATCTTCTGATAGACAATGATGGAATTCTAAAGATTGCGGACTTTGGATTAGCTTCATTCTTTGATCCTAATAACAAGCATCCTATGACTAGTAGAGTAGTCACTCTTTGGTATCGACCTCCCGAGCTTCTTCTTGGAGCTACTGATTATGGTGTGGGTGTTGATCTCTGGAGTGGTGGCTGCATTCTAGCTGAGTTATTGGCTGGAAAACCTATCATGCCTGGCCGTACTGAGGTTGAGCAGCTACACAAGATATTTAAGTTATGTGGTTCTCCCTCTGAAGAATATTGGAAAAAATCGAAGTTGCCGCATGCTACCATTTTCAAGCCTCAGCAGACATATAGACGATGCATACAAGAGACATATAAAGATTTTCCACCTTCATCTTTGCCCCTAATTGAGACCCTTCTTGCAATTGATCCAGATGAACGTCAGACTGCAACTGCTGCACTGGGAAGTGAATTCTTTACAACAAAACCATATGCTTGTGATCCTTCTAGCCTTCCAAAATATCCACCTAGTAAAGAAATGGATGCAAAGCTCCGGGATGAAGAAGCTAGAAGATTAAGGGCTGCTAGTAAAGCCAATGCTGATGGTGGTAAACGATCTCGTGCACGTGATCGAGCTGTGAGAGCAATTCCAGTTCCAGAAGCAAATGCTGAAATTCAGGCAAATATCGACAGACGGCGACTAATTACACATGCAAATGCTAAGAGCAAAAGTGAGAAGTTTCCTCCTCCACATGAAGATGGAACAATAGGATATCCATTAGGTTCTTCACAATACTTAGATCCTGCTTTTGATCCTCCGGATGTTCCGTTCAGTTCCACAAACTTCTCTTATCCAAAGGCACACATACAAACTTGGTCCGGGCCGCTGGTGGACCCTGCTGCCATGGCTCCTCCAAGACGAAAGAAGAATGTGACAGGTGATGGACATGCACAAACAAAGTCATCCAAAAAGGAATTGAAAATATGA 1698 0.4346 MGCVFGKQTSAKSVGQTVVETERVKEERKNEVRAARAEVVEVPNGGNRKEVGEEKSAKPRGERRRSSKPNPRLSNPPNHVHGEQVAAGWPSWLSKVAGEAINGLTPRRADSFEKLDKIGQGTYSNVYKAKDTVTGKIVALKKVRFDNLEPESVKFMAREILILRRLDHPNVVKLEGLVTSRMSCSLYLVFQYMEHDLAGLATNPAIKFTESQVKCYMHQLFSGLEHCHNRHVLHRDIKGSNLLIDNDGILKIADFGLASFFDPNNKHPMTSRVVTLWYRPPELLLGATDYGVGVDLWSGGCILAELLAGKPIMPGRTEVEQLHKIFKLCGSPSEEYWKKSKLPHATIFKPQQTYRRCIQETYKDFPPSSLPLIETLLAIDPDERQTATAALGSEFFTTKPYACDPSSLPKYPPSKEMDAKLRDEEARRLRAASKANADGGKRSRARDRAVRAIPVPEANAEIQANIDRRRLITHANAKSKSEKFPPPHEDGTIGYPLGSSQYLDPAFDPPDVPFSSTNFSYPKAHIQTWSGPLVDPAAMAPPRRKKNVTGDGHAQTKSSKKELKI* 566
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte3g00835 565 CDD STKc_CDK9_like 112 396 - -
Pte3g00835 565 MobiDBLite consensus disorder prediction 1 83 - -
Pte3g00835 565 Gene3D Transferase(Phosphotransferase) domain 1 195 436 - -
Pte3g00835 565 FunFam probable serine/threonine-protein kinase At1g54610 195 436 - -
Pte3g00835 565 Pfam Protein kinase domain 112 396 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte3g00835 565 SMART serkin_6 112 396 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte3g00835 565 ProSitePatterns Serine/Threonine protein kinases active-site signature. 232 244 IPR008271 GO:0004672|GO:0006468
Pte3g00835 565 Gene3D Phosphorylase Kinase; domain 1 100 194 - -
Pte3g00835 565 SUPERFAMILY Protein kinase-like (PK-like) 107 402 IPR011009 -
Pte3g00835 565 PANTHER CELL DIVISION PROTEIN KINASE 110 400 - -
Pte3g00835 565 ProSitePatterns Protein kinases ATP-binding region signature. 118 141 IPR017441 GO:0005524
Pte3g00835 565 MobiDBLite consensus disorder prediction 546 565 - -
Pte3g00835 565 ProSiteProfiles Protein kinase domain profile. 112 396 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte3g00835 565 MobiDBLite consensus disorder prediction 47 69 - -
Pte3g00835 565 MobiDBLite consensus disorder prediction 532 565 - -
Pte3g00835 565 Coils Coil 18 38 - -
Pte3g00835 565 MobiDBLite consensus disorder prediction 19 36 - -
Pte3g00835 565 FunFam probable serine/threonine-protein kinase At1g54610 99 194 - -
Pte3g00835 565 MobiDBLite consensus disorder prediction 476 506 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte3g00835 Pte-Chr3 6808674 6812717 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte3g00835 107 434 Core Cell Cycle Gene Families AT5G10270 50.872 1.03e-114 348
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-CRK7-CDK9 Pte3g00835 Pkinase 5.9e-67 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte3g00835 K08819 - qsa:O6P43_003509 989.564