Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte3g00821 ATGTCTACTCCCAGAAGCACCGATCATAGCACATCTTTCAAAGCGCATGAATCTACTCAAATGGGGTTTAACCTTATCCAGCGCAACACCGCATCTCCTATTCCATCTGGTGAGAGAAGAGGTAGAAGGAAGCAAGCAGAACCGGGAAGGTTTCTTGGGGTTAGGAGAAGACCATGGGGTCGATATGCTGCTGAAATCAGAGATCCAACTACAAAAGAAAGGCATTGGCTTGGAACCTTTGACACTGCACAGGAAGCTGCTCTTGCTTATGACAGAGCTGCACTTTCCATGAAAGGAGCTCAAGCAAGAACCAACTTCATTTACTCTGACAACACTGCCTTCCCAACTCTTCTTACTCCAATGGACATTCAAACTCTCTTGCCTTCGTCTCAGTTCTGCACTACGAACTGCAACTCTCAAAGCAAACGAAATCCATGTCAGAACAACGAGTTTCATTTCGGTGACAGTCCCAGTAATATTGGGACACAAATTCATTCAGAGACTGAAGTGTCCATGAAACCTGATCCAGTTGTGTCAACTGATCATCAAGATGATGGTTTCTTCTTCGCTAGTGACTCTAACTCAGGTTACTTGGAGTGCATCGTTCCTAATAGTTGTTTCAAACCACCTGCTTCCATTACTAGTTCATGCAATCCCAAAACAGATGTCAATGTTTCCAATGACAAAAACATTGACTACACTGATACAATAAATACCATCCACGGCGAATTATCACGTCTTGACAACTGGCCATTCCCTCAAGAAGGAATTAGGGTGTCTACCATGGCGTCTAATGTAGGATATTTTCCTTTCCTGGATCAAGGAATTTGGCATTATCAGCAATCATGGGACTATAATTCCAATGAACTATCAGCCATTGTGAACAACAACCCTATGATGGTTGAAGATGTCAGCATGGGAGATTTTTATCAATATCCAATCACAGACAGCAGTTCAAGTTATGGGCTAACGAGTCAAGCAGCTTCTTCATCGACTTGTTCTACATCATTTACTTCTTTTGGTGATGTAGACATGGGCTACTCACTCTTCTAA 1053 0.4274 MSTPRSTDHSTSFKAHESTQMGFNLIQRNTASPIPSGERRGRRKQAEPGRFLGVRRRPWGRYAAEIRDPTTKERHWLGTFDTAQEAALAYDRAALSMKGAQARTNFIYSDNTAFPTLLTPMDIQTLLPSSQFCTTNCNSQSKRNPCQNNEFHFGDSPSNIGTQIHSETEVSMKPDPVVSTDHQDDGFFFASDSNSGYLECIVPNSCFKPPASITSSCNPKTDVNVSNDKNIDYTDTINTIHGELSRLDNWPFPQEGIRVSTMASNVGYFPFLDQGIWHYQQSWDYNSNELSAIVNNNPMMVEDVSMGDFYQYPITDSSSSYGLTSQAASSSTCSTSFTSFGDVDMGYSLF* 351
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte3g00821 350 PRINTS Ethylene responsive element binding protein signature 51 62 IPR001471 GO:0003700|GO:0006355
Pte3g00821 350 PRINTS Ethylene responsive element binding protein signature 73 89 IPR001471 GO:0003700|GO:0006355
Pte3g00821 350 ProSiteProfiles AP2/ERF domain profile. 50 107 IPR001471 GO:0003700|GO:0006355
Pte3g00821 350 Gene3D AP2/ERF domain 50 108 IPR036955 GO:0003700|GO:0006355
Pte3g00821 350 MobiDBLite consensus disorder prediction 1 49 - -
Pte3g00821 350 PANTHER AP2 DOMAIN CLASS TRANSCRIPTION FACTOR 35 193 - -
Pte3g00821 350 MobiDBLite consensus disorder prediction 1 34 - -
Pte3g00821 350 Pfam AP2 domain 53 99 IPR001471 GO:0003700|GO:0006355
Pte3g00821 350 SUPERFAMILY DNA-binding domain 51 108 IPR016177 GO:0003677
Pte3g00821 350 SMART rav1_2 50 113 IPR001471 GO:0003700|GO:0006355
Pte3g00821 350 FunFam Ethylene-responsive transcription factor 2 50 108 - -
Pte3g00821 350 CDD AP2 50 106 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte3g00821 Pte-Chr3 6637165 6638217 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte3g00821 1 218 AP2-EREBP Transcription Factor Family AT5G18560 44.689 3.00e-58 190
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Pte3g00821 AP2 1.9e-12 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte3g00821 - - qsa:O6P43_021710 341.658