Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte3g00817 ATGTTTGGTTCTCATTCAAGACTGAGATCACTTGTGTGCCGGTATCGGAAGGGCATCGCTATAGCTGTTTCTACAACACAATCAGAATCACAATGCTACCAATCGATATTAAAAGCTAAAGATTTATGCTTTCAATCCCAGAGGTTGAGAAATGGGTACAGGTTGTACGGCACAAAAACCATATCTGCAAAGGGTGAAGAAGAGAAGTCTTTTACAGTGTCGTACCTCGTAAACAAATGTGGGTTGTCATCAGAAAGTGCTCTCTCAGCTTCCAAGAATCTCTATTTTCGGACCTCAGATAAACCCGACTCCGTTTTATCTTTGCTTAGAAGCTATGGTTTGTCGGAACCTCAGCTTCACCAAGTAATCAGAAAGTTCCCGCAGTTGCTTGCATTGGATCCTCGAAATTGCCTTCAACCCAAGTTGGAGTTTTTCATATCAAAAGGCCTTTCAAAATCTGAGCTCGCCCTAATGATCACGTGCTCCCCATATTTCTTAGGGAGAACCTTACATAATTTTATGATTCCTTTATTTGATTTAGTGAAGGACTTGGTTCTATGTAATGAACGAAAAGCCATCTTGGTTTTGAGAAACCAACTGATGACAAAAACATCTCATGATCGGGTGAAAGAGAATGTCAAGGTACTGCTGGATATTGGGGTCCCGAAGTCAAATGTTGCTCGAATGCTCCTAAACTGGCCTATTGGAGGCTGCAATTTGAGCACCTTCAAAAGGGGTGTGGCACAAGTGATGGAATTTGGGTTTGATCCGTTGAAAATATCTTTTGTTCGAGCATTGCAAGTTGTGCTGGGGATTTGCGAGTCCAAACGGACAAGGAAGATGGAGATTTATAAGAAGTGGGGTTGGTCTCATGAAACGACTCTTGCAGCATTTAGGAAGCAGCCCCTAATGATGATGGTCTCTGAGAAAAAAATTGAGGCAGTGATGGATTTTTGGGTAAACCAATTAGGATTTAATGTTTTGCTGCTTGCCAGAGATCCTATGATATTGAGTCTAAGTCTGGAGAGAAGAATTAAACCGAGAGCTGCTGTCCTCAAGTTTCTTTTGGCAGAAAGCTTCATAAAAGACAACACCAAGTTATTTACCCCTTTTGCTATTTCTGAAAATTATTTCCTTCAGAAATATGTGAATTCTTTCAAGGAAGCAGCTCCTTCGCTAATCAAGTTATATGAAGAAACACTAAATCTTTGTCAGGATAGCAAGTAG 1227 0.4075 MFGSHSRLRSLVCRYRKGIAIAVSTTQSESQCYQSILKAKDLCFQSQRLRNGYRLYGTKTISAKGEEEKSFTVSYLVNKCGLSSESALSASKNLYFRTSDKPDSVLSLLRSYGLSEPQLHQVIRKFPQLLALDPRNCLQPKLEFFISKGLSKSELALMITCSPYFLGRTLHNFMIPLFDLVKDLVLCNERKAILVLRNQLMTKTSHDRVKENVKVLLDIGVPKSNVARMLLNWPIGGCNLSTFKRGVAQVMEFGFDPLKISFVRALQVVLGICESKRTRKMEIYKKWGWSHETTLAAFRKQPLMMMVSEKKIEAVMDFWVNQLGFNVLLLARDPMILSLSLERRIKPRAAVLKFLLAESFIKDNTKLFTPFAISENYFLQKYVNSFKEAAPSLIKLYEETLNLCQDSK* 409
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte3g00817 408 FunFam Mitochondrial transcription termination factor-like 170 390 - -
Pte3g00817 408 PANTHER CGI-12 PROTEIN-RELATED 67 386 IPR003690 GO:0003690|GO:0006355
Pte3g00817 408 Pfam mTERF 106 318 IPR003690 GO:0003690|GO:0006355
Pte3g00817 408 Gene3D Transcription termination factor 3, mitochondrial 174 389 IPR038538 -
Pte3g00817 408 SMART mt_12 156 187 IPR003690 GO:0003690|GO:0006355
Pte3g00817 408 SMART mt_12 295 326 IPR003690 GO:0003690|GO:0006355
Pte3g00817 408 SMART mt_12 120 151 IPR003690 GO:0003690|GO:0006355
Pte3g00817 408 SMART mt_12 191 222 IPR003690 GO:0003690|GO:0006355
Pte3g00817 408 SMART mt_12 327 358 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte3g00817 Pte-Chr3 6611353 6614791 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Pte3g00817 mTERF 7.1e-26 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte3g00817 K15031 - qsa:O6P43_003535 288.885
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte3g00817 3 6611353 6614791 Pte3g00817 3 6611353 6614791 RCT