Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte3g00815 ATGGCTCCATCAAGAAAATCTAAAAGTGTGAATAAGAGGTTTTCCTATATTAGTGAAGTCACTTCTAGTAAAGACGGAGAAAATGCCAAGGGTAGGCAGCTCACATGTCCCGGCAACCAGAAGAAGAGGAAGTTAGCTGACATGTTAGGCCCTCCGTGGAGTAAGGCTGACCTTGAGCGGTTCTATGATGCATACAGAAGGCATGGAAAAGACTGGAAAAAGGTAGCTGCTGCAGTTCGTAATCGGTCTGTCCAAATGGTAGAGGCGTTATATACTATGAATAGGGCCTATTTATCTCTTCCCGAAGGCACTGCTTCTGTGATTGGGCTGATAGCAATGATGACAGATCACTATTCTGTACTGGAAGGAAGTGGCAGCGAAGGAGAAAACAATGAACATAGAGAAGAAATACAAAAACCACAAAAGCGTTTGCGGGGAAAGTCCCAAGAAAATACTCAGAGAGTAGGAAATGAGCATATCCCAGATAATTCACAGGCATATCCAGCTGCAACAGGTCTTGGCTTCCTGTCATTGCTTAAGAAGAACAACTCTGGAATTAAGCCTCATGCTGTTCGAAAGCGGACTCCAAGGATTCCTGTTTCGTATTCTAATAAAGACAATGAAAGGAAGCTCTTCCCACCTGCCAGGCAAGGCACAAACCAATTGGTTGACACTAATGGAGTTGCTCCTAAAATTACTCCAGATGTGACCAATGCCTTCCAGAAAGATGATCCATTGCAAATTTCTCGAACACCAAACAAAAAAGTGAGGGGAACTGTAACATCAGGAAGCCAGAACACTGAAAAGCATGATCAATCCACAGCAGCTGGTTGGAAGTTTCGTAGAGGTAGCTTGGATGAGGGAAATCCCAAATTAAGCTTAGGAAGCACGGAAGGTAATAATAAGCTAGGTGGTAGAAAAAAGAGTAATTTGAAGATTAGAGTAAGTTCTGGAACTCAAAATAAAGGTAATAGATCTCAGCAACAAAAACCAGATATGGGAGGAACAGTGAAACCACATTTGAATGCCATAAAGGAAGCCTATAGTGGGACAGACGAGGGGCAGAAACTGAGTGTTGTCAAAAAGCATCATGATGCTGAGGTCATGGATTCAGAAGTAGATGGAGACTCAGAGTTTGATGCTCTGCAAACCTTAGCTGACCTATCTTTAATGATGCCAAATGTTGATATGGAGACATCTGCCCAGGTGAATGAATTTGACGTTGTTGATGAGTCCAAAGGGAGTGAAAGTCATGCATCTGCAGAAATCAAAGGTTCGTGTAGCAAAACATCTAAACGGGGAAGACTTCCGTTAGATAATAAGGCTGCTATTGTGGAAGTGAAGATGGGAGCTGACCAACTTGATGCTGGAATAAGAAAAAGAAAACAGAAACCCTTACCTTTTAGAATTTTGAATGATGATGATCATTTGAGTTCCCATTCTGGTGATTCTCGCAAGACTGAGGGGTTGGATGACGGGAAGTCTGTGACCGAAGACAAACGCTCCTCTCTTAGTGCATCACATCCGAAACAAGTAAAGATGGTGAAAGTTCCTGCAGAGACATCTTCAACCACGGACAGGAGAGAAATTGATGGTCCTGCTTTATCTCCTATGCTTGCTTCATCTGTGGACCAACTCAACCTTGTGTCTAAGCGAAGTAAAAGAAAGATAGACAGGCCAAAACAAATTATCTCAAAACATCCTGAAACTTTTGGAGCTTCTGTCAATGGTCAAAAATGCAATAAACCTATTTCATCATTAGATGATGGGGTTCCTAGACTAAAGGAAGTGCTTTCAAATCAGCTATCATTCCCTCAAGTGCGGAGGTGGTGTGTTTTTGAGTGGTTCTACAGTGCTATTGATTACCCATGGTTTGCGAAAAGAGAGTTCATGGAGTATCTAGATTATGTGGGATTAGGTCATGTTTCAAAGTTAACTCGCATTGAGTGGGGAGTAATTAGGAGTTCTCTTGGCAAACCAAGAAGATTTTCCGAGCAGTTTCTAATGGAAGAGAAAGAGAAACTTAATCAATATCGAGAATCTGTTCGGATGCATTATGCTGAACTTATGGCCGGTTCCAGAGAAGGACTTCCAAATGATTTAGCACGTCCCTTACTCGTAGGACAGCATGTGACTGCAATTCATCCAAAAACAAAAGAAATTCATGAAGGGAATATATTAACTGTTGACGAATATCGCTACAGGGTCCAGTTTGACCAGCCTGAACTTGGAGTCGAATATGTCATGGATATTGACTGCATGCCCGTGAATCCTCTTGAGAATATGCCTGACTCTTTGCTAAGGTGCTATGTCACTGCTGGTAAATTATATGATTATTTCATTGGGGTCAAGCATAATGGACAACTGAAGGAAGGAAAGATTGAAGAAAACAAGAAGCCCACTAACAGTGAAAGCCCAGAGAAAATTTTTTGTCCTTCCTTAACTGCTTCAACTCATTGCATCAATGGCATGTCTAAGCAGTTACAAGCTAAAGTTGAGGATACCGAGACTGATAAAAATGAAATTGTTTCTCAACCTACTGTGTTTTCACAAATCCATGCAAAAGATGCTGATGTACTGGCTCTTTCTGAGTTGAACCGCGCTCTTAACAAAAAGGAGGTTGTGCTGTCCGAACTAAAGCAGTTGAATAATGAGGTGTTGGAAAGGCAACAAGTTGGCAACGATACTTTCGAGGATTCAGAGTCTTTCAAGAGGCACTATGCTGCTGTGCTGTTGCAATTAAGTGACGTCAATGATCAAGTTTCCTCTGCTCTGCTTTTCTTGAGGCAACGCAATACATATAGAGGGAGTTCTCCGTTGTCATCAAAGCCAATAGCTAAGTCAGAGGATCCTTCTCTCCAATCAAGCTCTTTCAGCCATTCAGCTTCTCATACATGCAGTACCCTGACTCACATAACTGAAATTGTAGACGGTTCTGCTGCAAAGGCCCGGATGATGGTCGATTCGGCATTGGAGGCCATTTCAGCTTTCAAAAAGATAGATAAGAAGGTTGAAAGGATTGAGGAAGCAATTGATTTTGTCTGCAATCGGCTATCCTCGAATGGCTCTACTGCATCGGCAATTAATTCAGTGCCTGTAGATTCTAGTCATGTTGCTCAGGCTTCTCAGGATCATTTGACTTCCAGTATGTTAAACCAGTTTGTTATTGGACACGGATGTGATTCAAAGTCAAATTCCTACGTCGACCAAACTGAAATCCAAATTCCCACAGAATTGATAGCTCAATGTCTTGCTACTTTGCTCATGATTCAGAAATGCACGGAGAGGCAATTTCCCCCATCAGATGTTGCCCAGTTACTAGATTCTGCTGTTACAAATTTGCGACCAATTTGTTCAAAGAACCTGCCAATATATGCCGAAATACAAAAATGCATGGGTATCATCAGAAACCAGATTCTGGCTCTCGTACCTACTTAG 3438 0.4194 MAPSRKSKSVNKRFSYISEVTSSKDGENAKGRQLTCPGNQKKRKLADMLGPPWSKADLERFYDAYRRHGKDWKKVAAAVRNRSVQMVEALYTMNRAYLSLPEGTASVIGLIAMMTDHYSVLEGSGSEGENNEHREEIQKPQKRLRGKSQENTQRVGNEHIPDNSQAYPAATGLGFLSLLKKNNSGIKPHAVRKRTPRIPVSYSNKDNERKLFPPARQGTNQLVDTNGVAPKITPDVTNAFQKDDPLQISRTPNKKVRGTVTSGSQNTEKHDQSTAAGWKFRRGSLDEGNPKLSLGSTEGNNKLGGRKKSNLKIRVSSGTQNKGNRSQQQKPDMGGTVKPHLNAIKEAYSGTDEGQKLSVVKKHHDAEVMDSEVDGDSEFDALQTLADLSLMMPNVDMETSAQVNEFDVVDESKGSESHASAEIKGSCSKTSKRGRLPLDNKAAIVEVKMGADQLDAGIRKRKQKPLPFRILNDDDHLSSHSGDSRKTEGLDDGKSVTEDKRSSLSASHPKQVKMVKVPAETSSTTDRREIDGPALSPMLASSVDQLNLVSKRSKRKIDRPKQIISKHPETFGASVNGQKCNKPISSLDDGVPRLKEVLSNQLSFPQVRRWCVFEWFYSAIDYPWFAKREFMEYLDYVGLGHVSKLTRIEWGVIRSSLGKPRRFSEQFLMEEKEKLNQYRESVRMHYAELMAGSREGLPNDLARPLLVGQHVTAIHPKTKEIHEGNILTVDEYRYRVQFDQPELGVEYVMDIDCMPVNPLENMPDSLLRCYVTAGKLYDYFIGVKHNGQLKEGKIEENKKPTNSESPEKIFCPSLTASTHCINGMSKQLQAKVEDTETDKNEIVSQPTVFSQIHAKDADVLALSELNRALNKKEVVLSELKQLNNEVLERQQVGNDTFEDSESFKRHYAAVLLQLSDVNDQVSSALLFLRQRNTYRGSSPLSSKPIAKSEDPSLQSSSFSHSASHTCSTLTHITEIVDGSAAKARMMVDSALEAISAFKKIDKKVERIEEAIDFVCNRLSSNGSTASAINSVPVDSSHVAQASQDHLTSSMLNQFVIGHGCDSKSNSYVDQTEIQIPTELIAQCLATLLMIQKCTERQFPPSDVAQLLDSAVTNLRPICSKNLPIYAEIQKCMGIIRNQILALVPT* 1146
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte3g00815 1145 Coils Coil 825 845 - -
Pte3g00815 1145 MobiDBLite consensus disorder prediction 127 149 - -
Pte3g00815 1145 Pfam Myb-like DNA-binding domain 52 87 IPR001005 -
Pte3g00815 1145 CDD SANT 52 87 IPR001005 -
Pte3g00815 1145 MobiDBLite consensus disorder prediction 21 35 - -
Pte3g00815 1145 MobiDBLite consensus disorder prediction 290 304 - -
Pte3g00815 1145 Pfam DIRP 615 716 IPR033471 -
Pte3g00815 1145 SUPERFAMILY Homeodomain-like 49 96 IPR009057 -
Pte3g00815 1145 MobiDBLite consensus disorder prediction 187 222 - -
Pte3g00815 1145 MobiDBLite consensus disorder prediction 236 338 - -
Pte3g00815 1145 MobiDBLite consensus disorder prediction 312 333 - -
Pte3g00815 1145 MobiDBLite consensus disorder prediction 240 273 - -
Pte3g00815 1145 SMART sant 49 97 IPR001005 -
Pte3g00815 1145 MobiDBLite consensus disorder prediction 410 434 - -
Pte3g00815 1145 Gene3D - 3 105 - -
Pte3g00815 1145 PANTHER LIN-9 1 1145 IPR010561 GO:0006351|GO:0017053
Pte3g00815 1145 Coils Coil 862 889 - -
Pte3g00815 1145 MobiDBLite consensus disorder prediction 467 534 - -
Pte3g00815 1145 SMART DIRP_2 616 717 IPR033471 -
Pte3g00815 1145 MobiDBLite consensus disorder prediction 467 506 - -
Pte3g00815 1145 MobiDBLite consensus disorder prediction 21 43 - -
Pte3g00815 1145 MobiDBLite consensus disorder prediction 122 167 - -
Pte3g00815 1145 MobiDBLite consensus disorder prediction 935 961 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte3g00815 Pte-Chr3 6589770 6601491 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Pte3g00815 DIRP 3.7e-30 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte3g00815 - - qsa:O6P43_021714 1172.92