Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte3g00792 ATGTCTTCTGCTGCATCATGGATCACAGCCCTGAGCTGTTCTTGTTCAAACACAGAATCTTCAGAACGTTCTTCTGCCGTATCGATTGCAGGCCAATGGATGAGATCCATCTTTCTGTCTCCTTGTCCTCAAAGGCTTATTGTTTCGTCACTTGACTTGCTGTTCCTGCTCACCCTTTTACTCTTTGCACTGCAAAAGCTGTATTCCAGACTGAGTTCTAAACGGGACTCCAGCTCCTCAGCAAGGGAGCCACTTCTTGAAAAGAAGGAGAATCCCTTCAAAGTTTTTCTTTCGTTCAAACTATCAATCCTTTTAACGGGTCTGTTGGCTACAGGCTACACAGTTCTAAGCATCTTTAGTTTCATTCATAGTACTGAGCCATCATGGAAGCTGGTGGAAGCAATATTCAGAATATCACAAACAATCACTCATTTGGCGATATTAGTTCTGCTTGTACACGAGTGGAAATTCAGAGCTGCCACACATCCTCTGACTCTCAGATTTTATTGGTTTGCTAATTTTGTCATAACCAGTTTGTTTGCAGCATCTGCAATCATTCGCTTGGTTACGATTCGTGATGGCAGCTTGGATTTCAACTTGAGGGTGGATGATATATTTTCATTGGTTGATTTTCCGATATCCATTTTCTTTGCTGTTGTGTCCCTAAGAAAATCTTCTGGGATCAGTGCTGTCGTAGATTCTGCTACAGCTGCAAACGGAAGGCATCTAGTTGATAGAGATGCCTATGTAAGTGATTATGTCTCAGCTTCTTTTCCATCCAAGGCATTGTGGCTTTGGATGAATCCTTTGTTAAATAAGGGATACAAGTCTCCTCTTAAGCTTGATGAGGTCCCAACTCTTCCACCCGAGTTCAGGTCTGAAGAGATGTGTTCGTTGTTTGAAAGGAATTGGCCCAAACCAGAAGAAAACTACAAGCATCCAGTTCTAATTACACTATTCCGGTGCTTCTGGAAAGATGTTGCCTTTACTGGTCTTCTAGCTCTGGTTAGACTCTCAGTAATGTATGTTGGTCCTTTGCTCATACAAGTTTTTGTTTCCTACACAGCCAGTGAGACTCGTTCTGTATCTGAAGGATGCCTCTTGGTGTTGATCCTTGTGCTTGCCAAAGCAACTGAAGTTGTCTCCAGCCATCATTTCCAATTCCATTCTCAGAAGCTAGGAATGCTTATTCGTGCAAGTCTCATAACTTCATTATACAAGAAGGGCCTGAAGTTATCATGCTCTTCAAGACAGGCTTCTGGGGTTGGCCAAATTGTTAACCACATGGCTGTGGATGCTCAACAGATGGCAGATATGATGTTGCAGCTGCACCCCCTTTGGATGATGCCAGTACAAGTTGGAGTTGCTTTAGCTCTCATCTACGGTTATCTTAATGTATCTATGTTTGCGGCAGTGTTTGGCCTTGTTGCAGTGAGTGCCTTTGTTATATTGCGCTCTAAAACAAACAATATGTACCAGTTTCTTGTGATGAAAAGCCGCGACTTAAGGCTGAAAGCAACGAATGAGATGCTTAACAATATGCGTGTGATCAAGTTTCTAGCATGGGAGGAGTATTTTGGTAAAAAGATTCAATCTTTTCGTGAATCTGAATACGGGTGGCTCGGCAAGTTCATGTATTCAATGGCTTTCAACTTTGCATTCCTTGGAATGTCTCCTCTTCTGATAGTATCTCTTACATTTGGCTCTGCAATTTTCTTGGGCATTCCACTTAGTGTTGGTACAGCTTTCACAGTTAGTTCAATCGTTAAAGTACTGCAGGAACCAGTCCGATCCTTCCCACAGTCTCTTGTCGCTATTTCACAAGCATTGATCGCCCTTGGAAGGTTGGATGGGTTCTTGACAAGCAAGGAACTGGATGAGAGTTCAGTTGAACGGGAAGAAAATTGTAATGAAGATCTCGGTGTTGAGATCAGGAATGGTTTATTTTCTTGGGATGATGAAGGTGGTGATTTTGTTCTAAAGGTTCCTAATCTTGAGATCAAGAAAGGTCGCCTTGCTGCAGTGGTTGGGACTGTTGGATCAGGAAAGTCTTCACTGCTGGCTTCTATTCTAGGTGAAATGCACAAACTCTCGGGAAAGGTCAAGATTTATGGAAGTTTGGCATATGTAGCACAGACATCATGGATACAAAATGCGTCCATCCAAGATAATATACTATTTGGTTCCCCAATGCATAGTCAAAGATACAAGGAAGTTATAAGTGTGTGTTGCCTGGAAAAAGACTTAGAAATGATGGAGTACGGAGACCAAACTGAGATTGGGGAACGTGGAATCAACCTCAGTGGGGGCCAGAAGCAAAGAATACAACTAGCCAGAGCTGTCTATCAGGACTGTGACTTGTATCTTCTTGATGATGTTTTTAGTGCAGTTGACGCTCAAACTGGATCAGAAATTTTCAAGGAATGCGTCCGTGGAGCACTCAAGGATAAAACCGTTGTGCTTGTAACTCACCAAGTTGACTTCTTGCATAATGCTGATTGTATAGTGGTCATGCGAGATGGGATGATTGTGCAATCTGGGAAGTATGATGAACTTCTTGAATTAGGCATGGATTTTGGTGCACTTGTTGCAGCGCATGAAGCTTCTATGGGGATTGTAGAGATGAGTGATATGTCCAATGGTGATGAATCTATGCTACCAAGTTCAACTCTTCCCTCTTCAAGTCAAGGGGAAGCTGATCAAAAGAAATATCTGGAGAGGTCCAAGTCTGATAAGAAAGGTGCTTCCAAGATTATTGAAGAGGAGGAAAAAGAAGCTGGTAATGTCAGATGGGAAGTCTATAAGCAATACTGCACTGAGGCGTATGGATGGTGGGGAGTGATACTCATCTCACTCTTGTCTCTATTGTGGCCATTGGCCTTAATGGCGGGGGACTACTGGCTATCATTCGAAACAAGAGATAATTATATACAGAATCCTTCGCTGTTTATTACTGTCTACTTGATTCTTGCAGTCATTGCATGCCTCCTAGTGTTCATTAGACAATTCATTGTTGCATATTGGGGGCTCGTAACAGCCCAGAGCTTCTTTACTGGAATTCTCGGTAGCATGGTCCATGCACCTATGTCATTCTTTGACACCACCCCTTCAGGCAGAATCCTTAGTCGTGCATCCACTGATCAATTCAACATTGATTTACTTGTTCCAATGTACATGAGCATGCTAGCAGTTATGTACTTGACAGTAGTTGCTGTTATCTTTGTTACATGCCAGTACGTTTGGCCGATTATATTCCTTGTAATTCCACTGTGCTGGCTGAATTTTTGGTACAGGGGATATTATCTTGCATCATCTCGAGAATTGAGTCGTCTCGATGCGATCACGAAAGCCCCAGTTATTCATCACTTTTCTGAAACCCTATCTGGTGTTATGACAATCCGAGGATTCAAAAAGCAGAATTCATTTATTCGGCAAAATGTCAACAAGGTCAATGCAAATCTGAGAATGGATTTCCACAATAATGGAGCAAATGAATGGCTGGGTTTGCGCTTGGAAATGTTTGGAATATCTGTCCTGTGCACTGCCACCTTGCTTATGATCTTTTTGCCAAGTACTATGATAAAGCCAGAAAATGTTGGACTCTCTCTTTCCTATGGCCTCGCACTCAATGGGGTCATCTTCATGGCCATTTATATGTCATGTTCAATTGAGAACAAAATGGTTTCAGTCGAAAGAATAAAGCAGTTTACTAATATTCCATCTGAAGCTCCATGGAAAATCCCCAAGAAGGTTCCTCCCAGTAATTGGCCTAGCCGTGGCGATGTTGTGCTATCAGATTTACAGGTCAGATATCGACACAATACTCCTTTAGTTCTCAAGGGGATTTCTCTTCGCATTCATGGAGGAGAAAAGATTGGTGTTGTTGGCCGTACGGGTAGTGGGAAGTCAACTCTGATCCAGGTTTTCTTTAGGTTGATTGAACCAACTGCAGGTCAGATTATCATTGATGGTATAGACATCTGCACACTAGGACTTCATGATCTCAGATGTCGTTTTGGGATTATTCCCCAAGACCCTGTCCTCTTTGAGGGCACAGTGAGAAGCAACATGGATCCACTTGGCTTATATTCAGATGAAGAAATCTGGAAGAGCCTAGAGCGCTGTCAGCTGAAAGAAGCAGTGGTGGCAAAGTCCGAAAAACTTGAAGCTCCAGTGGTTGATGGTGGTGATAATTGGAGTGTGGGACAAAGACAACTCCTCTGCTTAGGAAGGATAATGCTTAAGCGTTGCAAAATACTATTCATGGACGAGGCAACAGCTTCAGTTGACTCACAAACTGATGCTGCAATTCAGAAAATCATCAGAGAGGATTTTGCAGAATGTACAATCATTAGTATCGCTCACAGAATACCCACAGTCATGGACTGTGATAGAGTCTTGGTTATCGATGAAGGATGGGCAAAAGAATTTGATAAACCATCTCGTTTGCTTGAGCGACCCTCACTTTTTGGAGCATTGGTTCAAGAGTATGCCAACAGATCGTCGGACATCAATTAA 4518 0.4256 MSSAASWITALSCSCSNTESSERSSAVSIAGQWMRSIFLSPCPQRLIVSSLDLLFLLTLLLFALQKLYSRLSSKRDSSSSAREPLLEKKENPFKVFLSFKLSILLTGLLATGYTVLSIFSFIHSTEPSWKLVEAIFRISQTITHLAILVLLVHEWKFRAATHPLTLRFYWFANFVITSLFAASAIIRLVTIRDGSLDFNLRVDDIFSLVDFPISIFFAVVSLRKSSGISAVVDSATAANGRHLVDRDAYVSDYVSASFPSKALWLWMNPLLNKGYKSPLKLDEVPTLPPEFRSEEMCSLFERNWPKPEENYKHPVLITLFRCFWKDVAFTGLLALVRLSVMYVGPLLIQVFVSYTASETRSVSEGCLLVLILVLAKATEVVSSHHFQFHSQKLGMLIRASLITSLYKKGLKLSCSSRQASGVGQIVNHMAVDAQQMADMMLQLHPLWMMPVQVGVALALIYGYLNVSMFAAVFGLVAVSAFVILRSKTNNMYQFLVMKSRDLRLKATNEMLNNMRVIKFLAWEEYFGKKIQSFRESEYGWLGKFMYSMAFNFAFLGMSPLLIVSLTFGSAIFLGIPLSVGTAFTVSSIVKVLQEPVRSFPQSLVAISQALIALGRLDGFLTSKELDESSVEREENCNEDLGVEIRNGLFSWDDEGGDFVLKVPNLEIKKGRLAAVVGTVGSGKSSLLASILGEMHKLSGKVKIYGSLAYVAQTSWIQNASIQDNILFGSPMHSQRYKEVISVCCLEKDLEMMEYGDQTEIGERGINLSGGQKQRIQLARAVYQDCDLYLLDDVFSAVDAQTGSEIFKECVRGALKDKTVVLVTHQVDFLHNADCIVVMRDGMIVQSGKYDELLELGMDFGALVAAHEASMGIVEMSDMSNGDESMLPSSTLPSSSQGEADQKKYLERSKSDKKGASKIIEEEEKEAGNVRWEVYKQYCTEAYGWWGVILISLLSLLWPLALMAGDYWLSFETRDNYIQNPSLFITVYLILAVIACLLVFIRQFIVAYWGLVTAQSFFTGILGSMVHAPMSFFDTTPSGRILSRASTDQFNIDLLVPMYMSMLAVMYLTVVAVIFVTCQYVWPIIFLVIPLCWLNFWYRGYYLASSRELSRLDAITKAPVIHHFSETLSGVMTIRGFKKQNSFIRQNVNKVNANLRMDFHNNGANEWLGLRLEMFGISVLCTATLLMIFLPSTMIKPENVGLSLSYGLALNGVIFMAIYMSCSIENKMVSVERIKQFTNIPSEAPWKIPKKVPPSNWPSRGDVVLSDLQVRYRHNTPLVLKGISLRIHGGEKIGVVGRTGSGKSTLIQVFFRLIEPTAGQIIIDGIDICTLGLHDLRCRFGIIPQDPVLFEGTVRSNMDPLGLYSDEEIWKSLERCQLKEAVVAKSEKLEAPVVDGGDNWSVGQRQLLCLGRIMLKRCKILFMDEATASVDSQTDAAIQKIIREDFAECTIISIAHRIPTVMDCDRVLVIDEGWAKEFDKPSRLLERPSLFGALVQEYANRSSDIN* 1506
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte3g00792 1505 FunFam ABC transporter C family member 4 625 884 - -
Pte3g00792 1505 FunFam ABC transporter C family member 3 1245 1496 - -
Pte3g00792 1505 CDD ABC_6TM_ABCC_D1 329 616 IPR044746 GO:0140359
Pte3g00792 1505 Gene3D ABC transporter type 1, transmembrane domain 908 1243 IPR036640 GO:0005524|GO:0016020
Pte3g00792 1505 FunFam ABC transporter C family member 5 910 1243 - -
Pte3g00792 1505 MobiDBLite consensus disorder prediction 879 909 - -
Pte3g00792 1505 Gene3D ABC transporter type 1, transmembrane domain 315 617 IPR036640 GO:0005524|GO:0016020
Pte3g00792 1505 Gene3D - 1246 1494 IPR027417 -
Pte3g00792 1505 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 639 862 IPR027417 -
Pte3g00792 1505 SUPERFAMILY ABC transporter transmembrane region 316 616 IPR036640 GO:0005524|GO:0016020
Pte3g00792 1505 CDD ABCC_MRP_domain2 1260 1480 - -
Pte3g00792 1505 Gene3D - 618 881 IPR027417 -
Pte3g00792 1505 SUPERFAMILY ABC transporter transmembrane region 944 1248 IPR036640 GO:0005524|GO:0016020
Pte3g00792 1505 Coils Coil 905 925 - -
Pte3g00792 1505 Pfam ABC transporter 662 793 IPR003439 GO:0005524
Pte3g00792 1505 Pfam ABC transporter transmembrane region 976 1188 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Pte3g00792 1505 Pfam ABC transporter transmembrane region 330 596 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Pte3g00792 1505 MobiDBLite consensus disorder prediction 881 899 - -
Pte3g00792 1505 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1255 1495 IPR027417 -
Pte3g00792 1505 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 328 608 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Pte3g00792 1505 ProSitePatterns ABC transporters family signature. 767 781 IPR017871 GO:0005524|GO:0016887
Pte3g00792 1505 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 642 865 IPR003439 GO:0005524
Pte3g00792 1505 SMART AAA_5 1288 1472 IPR003593 GO:0016887
Pte3g00792 1505 SMART AAA_5 669 842 IPR003593 GO:0016887
Pte3g00792 1505 FunFam ABC transporter C family member 10 311 624 - -
Pte3g00792 1505 CDD ABC_6TM_ABCC_D2 965 1237 IPR044726 GO:0140359
Pte3g00792 1505 Pfam ABC transporter 1279 1427 IPR003439 GO:0005524
Pte3g00792 1505 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 944 1225 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Pte3g00792 1505 PANTHER ATP-BINDING CASSETTE SUB-FAMILY C 255 1498 - -
Pte3g00792 1505 CDD ABCC_MRP_domain1 642 841 - -
Pte3g00792 1505 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1262 1496 IPR003439 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte3g00792 Pte-Chr3 6426331 6434380 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte3g00792 1255 1486 Calmodulin-binding Proteins AT2G36910 29.614 1.36e-26 117
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte3g00792 - K05666 qsa:O6P43_003565 2060.03