Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte3g00787 ATGGACGGTAATAAAGATGAAGCACTCAGGTGTGTTGGTATAGCTGAAGAAGCTATAGCTTCAGGTAATAAAGAGCGTGCGCTTAAGTTTATAAAGATTGCACGACGGCTTGATCGAGATTTATCTGTTGATGAGTTGTTGGCCAAGTGTGAGACCCTTGAATTTGATTCGTCCTCTTCGTGTTCTGTTAATTGGGGGAGTGATCATAGCGTTGAAAAGGATGTTGGGGCAGTGAATGGTGGCAGGGATTCGAATCATGGGAGGACTTATAGTGAAGAACACGTTCAGTTGATTAGGCAGATTAAGGGGAATAATGACTATTATGTTATTCTTGGTTTGGAGAAGACTTGTTCTATAGAAGAGATTCGGCGAGCATACAGGAAATTGTCTTTGAAGGTTCATCCAGATAAAAACAAGGCTCCAGGTTCTGAAGAAGCATTTAAGAAGGTATCTAAGGCGTTCAAATGTTTAAGTGACCAAAGTTCGAGGAGGCAATATGATCAGACTGGATTGGTTGAGGAGTTTGAGCACAACCAACAGAACACTTTTAGGCGCAGAAGGAGGACAACAGATTATGATTTATTTGATGATGACTTTGATCCTGATGAAATATTTAGGACATTCTTTGGGCAAACCAACATGTATAGGGCAGCCAATGTATACAGGACACGAGGAATGGGTAATCAACGGAGGCAGGAATTTCATGGAGGAGGCCTTAACCTAGTCTTTCTTCTTCAAATAATACCGTTCTTATTAATTGTGCTTCTTGTCTATATACCTTTTTCTGAACCTGAATATTCACTGCACAAGAAGTACTCTTATCAGATTCCGAGAACTATAGAAAAACATGGAGTAACATTTTATGTTAAATCTTCAGCATTTGATTACAAGTTTCCACTTGGAAGTCCAGACCGTGCAGAAATTGAGAACAGTGTGATAAAGGATTACAAAGGTTTGCTGCGTCGTTATTGCCATACAGAGTTACAGAGGCGTCATTGGAACAGGAATCTGCCTACTCCTCACTGCGATAAACTACAGAATCTTGGAGAAGCATGA 1056 0.4034 MDGNKDEALRCVGIAEEAIASGNKERALKFIKIARRLDRDLSVDELLAKCETLEFDSSSSCSVNWGSDHSVEKDVGAVNGGRDSNHGRTYSEEHVQLIRQIKGNNDYYVILGLEKTCSIEEIRRAYRKLSLKVHPDKNKAPGSEEAFKKVSKAFKCLSDQSSRRQYDQTGLVEEFEHNQQNTFRRRRRTTDYDLFDDDFDPDEIFRTFFGQTNMYRAANVYRTRGMGNQRRQEFHGGGLNLVFLLQIIPFLLIVLLVYIPFSEPEYSLHKKYSYQIPRTIEKHGVTFYVKSSAFDYKFPLGSPDRAEIENSVIKDYKGLLRRYCHTELQRRHWNRNLPTPHCDKLQNLGEA* 352
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte3g00787 351 PRINTS DnaJ domain signature 126 141 IPR001623 -
Pte3g00787 351 PRINTS DnaJ domain signature 162 181 IPR001623 -
Pte3g00787 351 PRINTS DnaJ domain signature 108 126 IPR001623 -
Pte3g00787 351 PRINTS DnaJ domain signature 142 162 IPR001623 -
Pte3g00787 351 Gene3D DnaJ domain 103 221 IPR036869 -
Pte3g00787 351 PANTHER AT29763P-RELATED 1 347 - -
Pte3g00787 351 SMART dnaj_3 105 162 IPR001623 -
Pte3g00787 351 Pfam Domain of unknown function (DUF1977) 262 332 IPR015399 -
Pte3g00787 351 Pfam DnaJ domain 106 167 IPR001623 -
Pte3g00787 351 CDD DnaJ 106 159 IPR001623 -
Pte3g00787 351 ProSiteProfiles dnaJ domain profile. 106 170 IPR001623 -
Pte3g00787 351 SUPERFAMILY Chaperone J-domain 103 199 IPR036869 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte3g00787 Pte-Chr3 6395185 6398376 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte3g00787 4 167 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT2G01710 26.036 1.74e-07 50.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte3g00787 K09518 - mnt:21406269 479.174
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte3g00787 3 6395185 6398376 Pte3g00787 3 6395185 6398376 RCT