Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte3g00773 ATGGACGAGGAAACAAAGGACATGCCCAAGAGTTATGCAATAAGCGGCAAGATAATGCTTAGTGCAATTATTGTTCTCTTCTTTGTTGTTCTTCTCATGGCTATTCTCCACCTTTACGCGCGGTGGTACATCCTCCGTGCACGGCGTCGTCAGAACAATATCCGCCGTATGCGTCAACGCCAAAGACGGACACAAATTGTTTTTTATGGAGACCTTACCAACATGGAAGCATCATCCAACGGTGCTGGTTTGGCGTCAGCTGCAACGCGTGGCCTTGACGCTTCGGTGCTGAATTTATTGCCGGCTTTTGTTTACTCGTCGAAAATCCACCAAGAACCTATTGACTGTGCGGTGTGTTTGTCCGAGTTTGAAGAGAATGAAACGGGTCGGGTTTTGCCCAAATGCAATCACACTTTCCATATTGACTGTATTGACATGTGGTTCCATTCCCACTCCACTTGTCCACTTTGTAGGTCCACTGTTGAACCGGATGAAAGCAGAATTGAAACGGTTATCGATGTGGATGAACCCGGAGGCACTGAGCTGGGTTCGAGTTCCGGGGTTTGCTCCGGCTGTCAGTATGAAACTGCAAGCGAGGAAGATAATACCGCTTCTTCTTCGTCTGCTAGCGACAAGAGTAAGGTGTCGGCGATTGTGGGTATTACTGTTGAGGTGCCTAGACGGAATTGGAGCACAGGAATCTCAGAGGACGAATCGGGTCGGTGTGAATCGCCTTCGACTCAGTCGTCGTTCCGATCACCAATGAGTCGGATGTTGTCGTTTAAGAGAATGCTGAGCAGAGAGCGAAAAGGAAATAGTAACAGTCCGTCTTCACCGTCTGCAAACGTGGTGGGTTGCAGTTCGGTGATGGAGCCAATACTGAGCGATGGCGGCGGACGAGTGGAGACTCACTGA 915 0.494 MDEETKDMPKSYAISGKIMLSAIIVLFFVVLLMAILHLYARWYILRARRRQNNIRRMRQRQRRTQIVFYGDLTNMEASSNGAGLASAATRGLDASVLNLLPAFVYSSKIHQEPIDCAVCLSEFEENETGRVLPKCNHTFHIDCIDMWFHSHSTCPLCRSTVEPDESRIETVIDVDEPGGTELGSSSGVCSGCQYETASEEDNTASSSSASDKSKVSAIVGITVEVPRRNWSTGISEDESGRCESPSTQSSFRSPMSRMLSFKRMLSRERKGNSNSPSSPSANVVGCSSVMEPILSDGGGRVETH* 305
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte3g00773 304 MobiDBLite consensus disorder prediction 270 285 - -
Pte3g00773 304 SMART ring_2 116 157 IPR001841 -
Pte3g00773 304 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 82 164 IPR013083 -
Pte3g00773 304 MobiDBLite consensus disorder prediction 229 304 - -
Pte3g00773 304 MobiDBLite consensus disorder prediction 229 256 - -
Pte3g00773 304 CDD RING-H2_EL5-like 115 158 - -
Pte3g00773 304 PANTHER RING-H2 FINGER PROTEIN ATL51-RELATED 11 165 IPR044675 -
Pte3g00773 304 Pfam Ring finger domain 115 158 IPR001841 -
Pte3g00773 304 SUPERFAMILY RING/U-box 98 164 - -
Pte3g00773 304 ProSiteProfiles Zinc finger RING-type profile. 116 158 IPR001841 -
Pte3g00773 304 FunFam RING-H2 finger protein ATL3 84 163 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte3g00773 Pte-Chr3 6300023 6301605 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte3g00773 10 274 Rapid Response to Elicitors AT3G16720 50.182 2.70e-74 228
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte3g00773 - - qsa:O6P43_003585 310.071
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte3g00773 3 6300023 6301605 Pte3g00773 3 6300023 6301605 RCT