Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte3g00770 ATGGCTGGAGGCGGTGACAATAAGAAGAAGTTTGCCTTTCTGGGAGTGTCTTCAGTTCTTTTGGTGGCACTGTGTGTCGCTGTTGCCGTTGGTGTCAACCATAAAGGTTCCAAAGATGATGGGAGTGGAATTTCAACATCACAAAAATCTGTGCAGAAGCTATGCAACGCCACGGACTACAAGGATACATGTGAGAAGAGTCTCGAACCTGCAGCCAAAAATAGCTCAGACCCAAAAGAACTCATAAGGGGTGGTTTCAGTTATGCTATGGATGAACTCAGAGGCGTTATAAAGAACTCTAGTGTTTTGACTGAAGCTGAGAAGGATCCGAGAACCAAAGAGGCCTATGAAACCTGCAAAGAGCTTGTGGAACGCTCCATCGACGAATTCACTGATTCATTTGACAAGATGGGAAATTTTGATTTGACAAAACTTTCCGAGTACACAAACGACCTCCAGACCTGGCTTACTGCAGCCATGGCTCATCAAGGAGCTTGCTTGGATGCTTTTGAAAACACAACTGGCGATGCCGGTGAGAACATGAAGAAGTTGCTGAAAACCGCACGTGAAATCACAAGCAATGGTCTTGCCATGGTGACTGAGTTCAGTACCTTCTCTGATGATATTAGTAAACAAGTTGCAGGTGCAGCCAATGGCAGTAGCAGCAGCCGGAAACTCCTCACGACCAATGATGGTTTGCCTTCATGGATCAATGAGGGTCAGCGAAAGCTCCTTCAAGCCACTCCAGGAAACATTAAGCCTGATGCGGTTGTGGCCTCGGATGGCAGTGGAAAATTTAAAACCATTACCCAAGCTCTAAGTACAGTTCCAAAGAAGAACACCAAGCCCTTTGTGATTTATGTCAAGGCTGGCATTTATCGAGAGCAAGTGCTTGTTGACAAGAAAGTGAACAATGTCATGTTGCTCGGAGATGGTGCTACTAAGACCAAGATCACAGGCAACAAGAATTTTATCGATGGCACTGTCACCTTCAAAACAGCCACAGTTGCTGTGACGGGATCAAACTTCATTGCCAAGAACATTGGATTTGAGAATTCAGCAGGAGCAGCGAAGCACCAAGCAGTGGCACTAAGGGTAGGGGGAGACCACGCCATCTTCTACAATTGTCAGATGGATGGTTACCAAGACACACTCTACGCCCACTCCCACCGCCAGTTCTACCGTGACTGCACAGTCAGCGGCACAATCGACTTCGTCTTTGGCGATGGCGAAGCTGTGTTCCAGAACTGCAAGATGGTTGTCAGGAAGCCAATGGAGAATCAACAATGCATTGTGACAGCACAAGGCAGGGATGATAAGCGAGAGAACTCCGCCATTGTCCTCCAGAACTGCACAATATCCGGTGAACCCGCTTATATTCCGAACAAGCTAAAGAACAGAGCTTTCCTAGGAAGGCCATGGAAGCCATTGTCAAGGACCATCATCATGAATTCTCAGATTGATGACATTATTGCACCTGAAGGGTGGCTGCCATGGCAGGGTGATTTTGGAATCAAGACTTGCTACTATGGTGAGTTCAACAACAGAGGACCAGGTTCACCACAGACTAAAAGGGTGAAATGGCCATGCATCCAGAAGATTTCCCCAGCTACTGCAAAGAGCTTCACACCTGGAGTTTACTTTGGTGGCGATACATGGATTCCTCCAACTGGGGTTCCCTACACTGCTGGCATGATCAATGCTTAA 1707 0.471 MAGGGDNKKKFAFLGVSSVLLVALCVAVAVGVNHKGSKDDGSGISTSQKSVQKLCNATDYKDTCEKSLEPAAKNSSDPKELIRGGFSYAMDELRGVIKNSSVLTEAEKDPRTKEAYETCKELVERSIDEFTDSFDKMGNFDLTKLSEYTNDLQTWLTAAMAHQGACLDAFENTTGDAGENMKKLLKTAREITSNGLAMVTEFSTFSDDISKQVAGAANGSSSSRKLLTTNDGLPSWINEGQRKLLQATPGNIKPDAVVASDGSGKFKTITQALSTVPKKNTKPFVIYVKAGIYREQVLVDKKVNNVMLLGDGATKTKITGNKNFIDGTVTFKTATVAVTGSNFIAKNIGFENSAGAAKHQAVALRVGGDHAIFYNCQMDGYQDTLYAHSHRQFYRDCTVSGTIDFVFGDGEAVFQNCKMVVRKPMENQQCIVTAQGRDDKRENSAIVLQNCTISGEPAYIPNKLKNRAFLGRPWKPLSRTIIMNSQIDDIIAPEGWLPWQGDFGIKTCYYGEFNNRGPGSPQTKRVKWPCIQKISPATAKSFTPGVYFGGDTWIPPTGVPYTAGMINA* 569
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte3g00770 568 NCBIfam pectinesterase inhibitor domain 24 199 IPR006501 GO:0004857
Pte3g00770 568 FunFam Pectinesterase 47 203 - -
Pte3g00770 568 PANTHER PECTINESTERASE 24 555 - -
Pte3g00770 568 SMART PMEI_2 46 198 IPR006501 GO:0004857
Pte3g00770 568 Pfam Plant invertase/pectin methylesterase inhibitor 50 198 IPR006501 GO:0004857
Pte3g00770 568 ProSitePatterns Pectinesterase signature 1. 280 299 IPR018040 -
Pte3g00770 568 FunFam Pectinesterase 249 565 - -
Pte3g00770 568 CDD PMEI-like_3 54 204 - -
Pte3g00770 568 Gene3D - 249 565 IPR012334 -
Pte3g00770 568 Gene3D Invertase/pectin methylesterase inhibitor family protein 45 202 IPR035513 -
Pte3g00770 568 SUPERFAMILY Pectin lyase-like 253 564 IPR011050 -
Pte3g00770 568 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 49 202 IPR035513 -
Pte3g00770 568 Pfam Pectinesterase 255 550 IPR000070 GO:0030599|GO:0042545
Pte3g00770 568 ProSitePatterns Pectinesterase signature 2. 399 408 IPR033131 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte3g00770 Pte-Chr3 6287257 6289164 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte3g00770 8 566 Carbohydrate Esterase AT3G05610 50.355 0.0 610
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte3g00770 K01051 - cave:132167163 689.878