Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte3g00762 ATGGGAATGCTGAGAAGAACCCTACTTTATTTTCCCGTGTTTCTCTTCACTTCCATCACCACCGTTTTAGCTGACGATGGCGCTGTGATGAACGAGCTACTGAAAGCCATCTCCCCACCTGGGTGGTCCGGGAAGACTCCATTTTGCCAATGGGATGGTGTAAAGTGCGACTCTTCAGGCAGAGTCACTACCATCAACCTTGCATCTAAGTCACTTTCTGGGACACTACCTTCTGATCTCAATTCTCTCTCCGCTTTAACTACACTTTCCCTTCAAAGGAATTCACTTTATGGTCCGTTTCCTACTTTGGCCAACCTCTCTGCGCTCCAAAATGTGTACTTGGACTACAACAACTTCACTAGCATAACACCGGCTTGTTTCCAAGGCCTAACAAGCTTGCAGACGTTGAGTATGAGCAACAATGAGAATCTTGAGCGATGGAATCTGCCGCCTGAGTTGAACCAGCTCACCAGCCTTGTCACTCTTGATATGGGGACTGCTAATCTCATGGGTTCTATACCTGATGTGTTTGATTCCTTTCGAAGTCTGCAAGATGTGAGGCTTTCTTACAATAACCTTACTGGGTCTCTGCCGAAGTCTTTTGGAGGATCTGGGATTAGGAACTTGTGGATCAACAACCAGGTTTCTGGATTGTCGGGTAACCTTGACGTTTTGGGTTCAATGAGTCAGTTGTATCAGGTGTGGCTTCATAAGAACCAGTTCACAGGTCCAATTCCTGACCTTTCACATTGCAAAAATTTGATGGATCTTCAGCTCAGGGATAATCAGTTGACAGGTATCGTCCCACCCTCTTTACTGCAACTTTCAAGCCTGCTAAACGTTTCTTTGGATAACAACAAGTTACAGGGTCCATCGCCTTCGTTTGGTTCTGGGGTGAAGGTCACTCTTGATGGTATCAACAGCTTTTGTAAGAAAACTCCTGGACCCTGTGATCCACAGGTTACCATTTTGCTAGAGATTGCTGCAGCATTTGGATATCCGTATAGTTTGGCAGATTCATGGGACGGGAATGATGCTTGTGCTCCATGGAGTAGAGTTGTATGTGATTCAGAGAAGAATATAATCACGCTAAATTTTGGGAAGCAGGGTTTAAATGGAACGATTTCACCTGCATTTGGGAATCTAACAGCTTTGAAGAGCTTGTATCTGAATGACAATAATTTGACAGGACCGATCCCTGAGACTTTATCTGCTTTGCCAAATTTTCAGACTCTTGATGTTTCTAACAACAATCTTACAGGGGATATTCCGAAATTTGGTGGTGTGAAGTTGCTTACAGCTGGTAATCCCTTGCTTGTGAAAGCCCCTGGCCGTGGAGGTGGTGGAGTGACTCCCTCCCCTGGTTCAAATTCTACAGCACCTGGTGAAAGTGCTTCTGGAAGGTTAGGTAGTTCTTCACAGTCACCTGGCTTGATTGCTGGTATAGTTATTGGTTTTGTGTTCTTTACTGCTGTTGTGTTGTTTGTCACCTATAAATGTATCGTCAATAACCGGCGTAGAAAATTTGGAAGGGTAAACAATCCTGAAAATGGAAAGGAAATTAAGATTGATGTAATGAGTAGCTCGAATGGGTACAACTGTGTTCCAAGTGAAATACAAAGCCAAAGCAGTGGCGAACCGAGTGATCTTCATGTTTTTGATGGTGGAAATGTAGCTATCTCAATTCAGGTTCTTCGGCAGGTCACAAACAATTTCAGTGAGGAGAACATTTTAGGTAGAGGAGGATTTGGGGTTGTCTACAGAGGGGAACTGCACGATGGAACCAAAATTGCTGTGAAGAGAATGGAATCTGTTGCAGTGGGAACTAAAGGAATGAACGAGTTTCAAGCAGAGATTGCTGTGCTCACTAAAGTTAGGCATAGACATTTGGTTGCTCTTTTGGGGTATTGTATTAATGGAAACGAGAGGCTTTTGGTATATGAGTTTATGCCGCAAGGAACACTGACTCAACATGTATTTGAGTGGCGCGAAAATAATCACACTCCTCTCACTTGGAAGCAAAGGGTTTCGATAGCTTTAGATGTTGCAAGAGGTGTGGAATATCTTCATAGTTTAGCGCAGCAGAGCTTCATTCACAGAGACCTAAAACCCTCAAACATACTATTAGGAGATGACATGAGGGCCAAGGTAGCAGATTTTGGTTTAGTTAAAAATGCACCCGATGGGAAATATTCTGTAGAGACAAGGTTGGCTGGAACATTTGGATATCTTGCACCTGAGTATGCAGCTACCGGAAGAGTCACAACCAAAGTGGATGTTTATGCATTTGGTGTTATTTTGATGGAGCTGATAACCGGTCGGAGGGCACTGGATGATACTATGCCAGATGATAGGGCTCATCTAGTGACATGGTTCCGCAGAGTCCTCATCAACAAGGACAACATTCCAAAGATTATTGACCAAACGCTCAACCCTGATGAGGAAACCATAGAGAGTATAAACAAGGTGGCTGAGCTAGCAGGACATTGCACAGCCCGTGAGCCATACCAGAGACCAGATATGGGACACGCAGTGAATATTTTGGTCCCTCTTGTAGAACAATGGAAACCTACACGCCAAGAAGATGAAGATAGTTCTGGCATCGACTTACATATGACCCTCCCTCAAGCTTTGCAAAGATGGCAGGCTAATGAAGGCACTTCAACAATGTTTGAAGGCATGTCTTTCTCACAAACACAGTCAAGCATTCCCTCGAAACCCTGTGGGTTTGCAGACTCCTTTGATTCGATGGACTGTCGATGA 2763 0.4423 MGMLRRTLLYFPVFLFTSITTVLADDGAVMNELLKAISPPGWSGKTPFCQWDGVKCDSSGRVTTINLASKSLSGTLPSDLNSLSALTTLSLQRNSLYGPFPTLANLSALQNVYLDYNNFTSITPACFQGLTSLQTLSMSNNENLERWNLPPELNQLTSLVTLDMGTANLMGSIPDVFDSFRSLQDVRLSYNNLTGSLPKSFGGSGIRNLWINNQVSGLSGNLDVLGSMSQLYQVWLHKNQFTGPIPDLSHCKNLMDLQLRDNQLTGIVPPSLLQLSSLLNVSLDNNKLQGPSPSFGSGVKVTLDGINSFCKKTPGPCDPQVTILLEIAAAFGYPYSLADSWDGNDACAPWSRVVCDSEKNIITLNFGKQGLNGTISPAFGNLTALKSLYLNDNNLTGPIPETLSALPNFQTLDVSNNNLTGDIPKFGGVKLLTAGNPLLVKAPGRGGGGVTPSPGSNSTAPGESASGRLGSSSQSPGLIAGIVIGFVFFTAVVLFVTYKCIVNNRRRKFGRVNNPENGKEIKIDVMSSSNGYNCVPSEIQSQSSGEPSDLHVFDGGNVAISIQVLRQVTNNFSEENILGRGGFGVVYRGELHDGTKIAVKRMESVAVGTKGMNEFQAEIAVLTKVRHRHLVALLGYCINGNERLLVYEFMPQGTLTQHVFEWRENNHTPLTWKQRVSIALDVARGVEYLHSLAQQSFIHRDLKPSNILLGDDMRAKVADFGLVKNAPDGKYSVETRLAGTFGYLAPEYAATGRVTTKVDVYAFGVILMELITGRRALDDTMPDDRAHLVTWFRRVLINKDNIPKIIDQTLNPDEETIESINKVAELAGHCTAREPYQRPDMGHAVNILVPLVEQWKPTRQEDEDSSGIDLHMTLPQALQRWQANEGTSTMFEGMSFSQTQSSIPSKPCGFADSFDSMDCR* 921
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte3g00762 920 FunFam Receptor-like kinase TMK4 24 315 - -
Pte3g00762 920 CDD STKc_IRAK 578 851 - -
Pte3g00762 920 MobiDBLite consensus disorder prediction 451 470 - -
Pte3g00762 920 ProSitePatterns Serine/Threonine protein kinases active-site signature. 697 709 IPR008271 GO:0004672|GO:0006468
Pte3g00762 920 FunFam Leucine-rich repeat receptor-like kinase 319 442 - -
Pte3g00762 920 SMART LRR_typ_2 180 203 IPR003591 -
Pte3g00762 920 SMART LRR_typ_2 382 406 IPR003591 -
Pte3g00762 920 SMART LRR_typ_2 275 298 IPR003591 -
Pte3g00762 920 SMART LRR_typ_2 106 129 IPR003591 -
Pte3g00762 920 SMART LRR_typ_2 130 156 IPR003591 -
Pte3g00762 920 Pfam Protein tyrosine and serine/threonine kinase 575 846 IPR001245 GO:0004672|GO:0006468
Pte3g00762 920 Gene3D Ribonuclease Inhibitor 319 442 IPR032675 -
Pte3g00762 920 SMART serkin_6 572 852 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte3g00762 920 SUPERFAMILY Protein kinase-like (PK-like) 547 848 IPR011009 -
Pte3g00762 920 Gene3D Ribonuclease Inhibitor 28 314 IPR032675 -
Pte3g00762 920 Pfam Leucine rich repeat 378 419 IPR001611 GO:0005515
Pte3g00762 920 Pfam Leucine rich repeat 108 164 IPR001611 GO:0005515
Pte3g00762 920 ProSiteProfiles Protein kinase domain profile. 572 852 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte3g00762 920 MobiDBLite consensus disorder prediction 443 470 - -
Pte3g00762 920 SUPERFAMILY L domain-like 42 433 - -
Pte3g00762 920 Gene3D Transferase(Phosphotransferase) domain 1 650 873 - -
Pte3g00762 920 ProSitePatterns Protein kinases ATP-binding region signature. 578 600 IPR017441 GO:0005524
Pte3g00762 920 PANTHER OSJNBA0070M12.3 PROTEIN 12 920 - -
Pte3g00762 920 Pfam Leucine rich repeat N-terminal domain 25 57 IPR013210 -
Pte3g00762 920 Pfam Leucine rich repeat N-terminal domain 318 356 IPR013210 -
Pte3g00762 920 Gene3D Phosphorylase Kinase; domain 1 535 649 - -
Pte3g00762 920 FunFam receptor protein kinase TMK1 650 867 - -
Pte3g00762 920 FunFam receptor protein kinase TMK1 534 649 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte3g00762 Pte-Chr3 6220165 6223892 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte3g00762 62 841 Receptor kinase-like Gene Family AT5G07280 32.882 3.21e-97 329
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-IX Pte3g00762 PK_Tyr_Ser-Thr 2.6e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte3g00762 K00924 - qsa:O6P43_002591 1355.89