Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte3g00757 ATGGCTTCCGATTCGTCTTCTGAAGGAGTGCCACTCTCATCAAGAAGTAGTAAGATGAGTACGGAAGAAAAGAGAGAACTTGTCTATGAAATATCAAAATGGCCCCATGGTGCATCTGAAGTGTTACAGTCTTGGAGTCGCCAAGAAATTTTGCAGATATTGTGTGCAGAATTGGGAAAGGAAAGGAAATACACCGGCTTGACAAAGGTAAAAATTATAGAAAACCTACTGAAAATTGTATCTGAAAAGAAAGGAGGGAGCCATGATGCTGCTGTAGAACTCGAACCTACTTCTTCTCCTATACTTGGGCAAAAATTTACAAAGAGGCAGAGGAAAACTGAGAATCCATCTCGCTTACCTGTCCCTGTGAACAATCTCTCTGTCATTAACGGTGGTTCTGATCTAGGTAATATTGTATACTGCGGAAATTCCGCTTGCAAAGCTACCTTAAGTGGAGAAGATACATTTTGCAAGAGGTGTTCCTGTTGTATCTGTTATAAGTATGATGACAACAAAGATCCTAGCCTATGGTTAATATGCAGCTCTGAGCCTCCAATTCTTGGTGATTCTTGTGGTCTATCATGTCATCTTGAGTGTGCTTTGACTAATGGAAGTTCTGGTATTATGGAAGATGGACGGCGTTCCAAGCTGGATGGGACTTTCTATTGTGTCTCCTGTGGAAAAGTGAATGATCTGCTTGGATGCTGGAGAAAACAACTTACGATAGCAAAGGAAACCAGACGTGTCGACATACTGTGCTATCGACTATCCTTGAGCCAGAAGCTTCTACAAGGGACAGAAAAGTATCTGAAGCCTCTTGAAATAGTGGACAAAGCTGTGAAGAAACTTGAACCTGAAGTTGGCCCATTGACCGGTTTGCCAGTCAAGATGGGCAGGGGTATTGTGAACAGACTTTCATGTGGACCAGAAGTTCAGAAACTCTGCGCTTTTGCTGTAGAATCACTGGATTTATTCATTGATGAAAATATATTGTATCCATCCCTTGTTTCTATTGGTCAAGGGTTGATATCATCTGATACAGTGAGATTTGAAGATGTCACTGCAACATCGCTTACTGTGACACTTGCTACTCTAGACAGGCCTGCAGGACAAATTATTGGTTACAAGTTATGGCATCGTAAGGCTCTTGATATGGATTACCCTGTACAACCAACTTGCACTTTGTTCTTACCAAATACGAAGTTCACTATCAGAGGCTTATCTCCAGCTACAGAGTATCTTTTTAAAGTTGTTTGCTTTAATGAGGCAACGGAATTCGGCACATGTGAACTTTCTTTCTCAACTCTGAACGCTGATAATGAAGTCCATAATTGCTTGACAATAGACAGAAGCGAGAGCCCCACAACCAACTGTAGTAGCCTTTCCAATCCTTCCTCTGTTGAAGATGAAACCAATAACTGTAATCCATACAGCGGCCAGACTGATAATGGCAATCCATATGGGGTTGCTTTGGCAAAACTATCTAATGGTACTGCTAATTGCACTCGCAAGAGCAATGGAGGACTTGCAGGCGATGCTGATTCTTTGTTCGGGAAGGAGCATGGCATAGTATTACTTGGAACTGTGCCTGGTTCTGATGGGCTGCAACTAGAAAATAAACACTCATCAGAGGGTCATAACATCATTGAGGACATGAGTACTGATGGTGGTTTAAATTCTCCTGTTATGACTGGGGTACAAACCATGCCATTGGTACAGAGTAGCTCTGAGGCTGGTCTGCCTATAACCCCTTGCAGGCTGGAAGTAGTTAAGGATGGTGTTGGAAGGAGTGGAAGATCTAAATCTTGCAGAAAAGATCATGAAAATGGAAGTGGAAAGAGAGAGAGGCCTCAAGATGGCTGTACGTCAAGAAAGAGAAGTGGGGATGGACATGATAAGGTCTCTGAAGCGAACAACCTTACAGATTTTGATTTTGAAAATAATGTGAAGGTGATTAGACAGCTAGAGTGCGTTGGGCATATAGAGAAGAATTTCAGGCAGAAATTCTTGACTTGGTACAGCTTGAGAGCAACACCCCAGGAAGTGAAAGTTGTGAAAGTTTTCATTGATGCATTCTTGGAAGACCCGGCAGCTCTTGCAGAGCAGCTTGTGGATACCTTTTCTGAATGTGTATCAAGCAAAAGAATCTCCGTTGTACCGGCCGGGTTCTGCATGAAGCTTTGGCATTGA 2190 0.4256 MASDSSSEGVPLSSRSSKMSTEEKRELVYEISKWPHGASEVLQSWSRQEILQILCAELGKERKYTGLTKVKIIENLLKIVSEKKGGSHDAAVELEPTSSPILGQKFTKRQRKTENPSRLPVPVNNLSVINGGSDLGNIVYCGNSACKATLSGEDTFCKRCSCCICYKYDDNKDPSLWLICSSEPPILGDSCGLSCHLECALTNGSSGIMEDGRRSKLDGTFYCVSCGKVNDLLGCWRKQLTIAKETRRVDILCYRLSLSQKLLQGTEKYLKPLEIVDKAVKKLEPEVGPLTGLPVKMGRGIVNRLSCGPEVQKLCAFAVESLDLFIDENILYPSLVSIGQGLISSDTVRFEDVTATSLTVTLATLDRPAGQIIGYKLWHRKALDMDYPVQPTCTLFLPNTKFTIRGLSPATEYLFKVVCFNEATEFGTCELSFSTLNADNEVHNCLTIDRSESPTTNCSSLSNPSSVEDETNNCNPYSGQTDNGNPYGVALAKLSNGTANCTRKSNGGLAGDADSLFGKEHGIVLLGTVPGSDGLQLENKHSSEGHNIIEDMSTDGGLNSPVMTGVQTMPLVQSSSEAGLPITPCRLEVVKDGVGRSGRSKSCRKDHENGSGKRERPQDGCTSRKRSGDGHDKVSEANNLTDFDFENNVKVIRQLECVGHIEKNFRQKFLTWYSLRATPQEVKVVKVFIDAFLEDPAALAEQLVDTFSECVSSKRISVVPAGFCMKLWH* 730
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte3g00757 729 MobiDBLite consensus disorder prediction 1 21 - -
Pte3g00757 729 PANTHER VIN3-LIKE PROTEIN 2-RELATED 14 729 IPR044514 GO:0010048|GO:0040029
Pte3g00757 729 Pfam PHD - plant homeodomain finger protein 141 260 IPR032881 -
Pte3g00757 729 MobiDBLite consensus disorder prediction 1 17 - -
Pte3g00757 729 ProSiteProfiles Fibronectin type-III domain profile. 344 438 IPR003961 GO:0005515
Pte3g00757 729 Pfam Fibronectin type III domain 348 424 IPR003961 GO:0005515
Pte3g00757 729 Gene3D Immunoglobulins 344 448 IPR013783 -
Pte3g00757 729 CDD PHD_VIN3_plant 161 226 - -
Pte3g00757 729 CDD FN3 348 425 IPR003961 GO:0005515
Pte3g00757 729 SMART FN3_2 342 426 IPR003961 GO:0005515
Pte3g00757 729 SUPERFAMILY Fibronectin type III 348 424 IPR036116 GO:0005515
Pte3g00757 729 MobiDBLite consensus disorder prediction 595 636 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte3g00757 Pte-Chr3 6185771 6189944 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte3g00757 4 596 PHD Gene Family AT4G30200 47.385 1.65e-165 489
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte3g00757 - - qsa:O6P43_002848 947.192
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte3g00757 3 6185771 6189944 Pte3g00757 3 6185771 6189944 RCT