Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte3g00747 ATGGAGAGGCTGCATCTTACCAAACGTAGACGTGTTTATTCTGTTGAACCGGGTAGGAGAATACAAGTACAACGCTTGTTTGCAAGAGAGTATGTGAACTATTTGGTGCCAGCTCTGATGCAGATTAGGAACCTGAAGCATTCTTCAGAAAACAACAATGATGTGCTAAAAAACAAGGTGAAGTATGAAGCAGACACGGCACTGGCACTCTCAGCAAGAGGGCTTGCCTGGGGCAATGCGCTAAGAAATGAGCTTCAAAGAGATATCGCTGAACCCCCAAAAAGCAACAGCGACATTGTTGAACAACAGGTCGCTGGTTCATTACTATGGGCTAGTGACCAAACTGGCCAACTGGCTCCGAAAGAATTCAAGCCAAACCCTAGCATATGGCCTTTGATGAAAGAGAATAAAAAGGATTGTGAGGAAACGAATGTAAAGTTGAGAAATCTCAGACTGCTTATGCCTGGTGGGGATCAGATGGCCGATGATGAAGAAATGCTTGCTGAACTAGTAAGTTACATTAGCTGCTTGAAAATGCAGGTTGAAGTTCTTCAATGCTTAGTGCAGATTATACACTGA 579 0.437 MERLHLTKRRRVYSVEPGRRIQVQRLFAREYVNYLVPALMQIRNLKHSSENNNDVLKNKVKYEADTALALSARGLAWGNALRNELQRDIAEPPKSNSDIVEQQVAGSLLWASDQTGQLAPKEFKPNPSIWPLMKENKKDCEETNVKLRNLRLLMPGGDQMADDEEMLAELVSYISCLKMQVEVLQCLVQIIH* 193
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte3g00747 192 CDD bHLH_AtIBH1_like 134 188 IPR044549 GO:0006355
Pte3g00747 192 PANTHER TRANSCRIPTION FACTOR IBH1-LIKE 1 25 190 IPR044660 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte3g00747 Pte-Chr3 5989253 5989994 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte3g00747 1 85 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G30180 40.000 2.03e-11 57.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte3g00747 - - qsa:O6P43_002835 132.494