Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte3g00733 ATGTCGTCTTGTTTGAGTGGAGGTGGAGGAAGAACCTATAGGTTCGACTTTGAATTTGCGAAAGCCACGTCTACCTCGACCAAAACCTCTCAATCGTCATCTTCACCTTCCTCGACCATATCTGAATCGAGCTACTCCCCACTAGCAATCTCAACTCGAAAAGCTCGGACTCCACGAAAACGTCCCAACCAAATTTACAATGAAGCTGCTGCGCTTCTCTCTACAGCTTACCCGAAAATCTTCCCCACAAAAGGCCTCACAACAAAACCCCGGAAATTCACAAAACCTACAGACACGTTATGTTTCGACGACTCCCCTGAGATGCTGTTCCCATTCAGAGTCATTGAGAGCTCTGAATTTCTCCTTCACCAACCAATTCAAGACAAACCCAGTTTCCAAATTGAGTCAAAAGTCGTAAATTTTCCAGAAAAGCTATGCCATAGTCCTGGGGAAATCATTTCAGGGGTGAATTTCTTGGAATTAGGAAACGACTGCGAAGAAGATTTTGATGCTGAATCAATCCTTGATGAAGAAGTCGAAGAAGGAATTGATAGCATAATGGGAAATAGAGCTGATGATGATTCCAATGCAGCTTTCTGTCAAGTAAATTCCTCATGGTATGGGAACACGGTAATGGGGTTTAGTCTTGGAGGGAAATTTGATTACGGGTGCGGGTTCAGACGAAGTGCCGTGAGCGCTCTCAGAAATGTTGATGATGGGAATTGGTGGAGATTTCCGACGGTGGATATACGTCAAATCTCGCCTAAGCTGGAGAAGTCTTCACCTTTGTCATCTGCAGAGAAAAAGAAGAAGAAACACAAGAAAGTGGAAAAGCCAAAGCCAAAGCCAAAGCCAAAGCCAGAGCCAGAGCCAGAGCCAGACACTGCTGAATCCAAGGACAACGATATGGTGTCTGAATTAGATTTGGAATTGTCAAAACAAAATTCCAAATCCTCTGGCTTGCAGTTGAACTTGGATTATAACGGGGTTCTGAAAGCTTGGTCTGGACGAGGTTCGCCATTTTCCGATGAATCCATCGGCTCTCATGCACAAGGAAACGATATTAACGCTCGGTTGGCTCAAATTGATTTGTTATTGGACAGTGGGGGAGTGAGAGAAGCTAGCGTGATGCGGTACAAGGAAAAGCGGCGTACGCGGCTCTTCTCTAAGAAGATCAGGTATCAAGTCAGAAAAGTAAACGCAGATCAACGGCCCAGAATGAAGGGTCGGTTTGTGCGGAGGCCAAACTCTAACACAAGCTCGAAGAGGGTTGATAATAAAGCTAAGGCAAAAGAGCATTCTCTTCGGGACATTCTATTGTTTCATTAA 1329 0.4485 MSSCLSGGGGRTYRFDFEFAKATSTSTKTSQSSSSPSSTISESSYSPLAISTRKARTPRKRPNQIYNEAAALLSTAYPKIFPTKGLTTKPRKFTKPTDTLCFDDSPEMLFPFRVIESSEFLLHQPIQDKPSFQIESKVVNFPEKLCHSPGEIISGVNFLELGNDCEEDFDAESILDEEVEEGIDSIMGNRADDDSNAAFCQVNSSWYGNTVMGFSLGGKFDYGCGFRRSAVSALRNVDDGNWWRFPTVDIRQISPKLEKSSPLSSAEKKKKKHKKVEKPKPKPKPKPEPEPEPDTAESKDNDMVSELDLELSKQNSKSSGLQLNLDYNGVLKAWSGRGSPFSDESIGSHAQGNDINARLAQIDLLLDSGGVREASVMRYKEKRRTRLFSKKIRYQVRKVNADQRPRMKGRFVRRPNSNTSSKRVDNKAKAKEHSLRDILLFH* 443
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte3g00733 442 PANTHER CCT MOTIF FAMILY PROTEIN, EXPRESSED 1 417 - -
Pte3g00733 442 MobiDBLite consensus disorder prediction 408 431 - -
Pte3g00733 442 MobiDBLite consensus disorder prediction 266 280 - -
Pte3g00733 442 MobiDBLite consensus disorder prediction 256 301 - -
Pte3g00733 442 Pfam CCT motif 372 414 IPR010402 GO:0005515
Pte3g00733 442 ProSiteProfiles CCT domain profile. 372 414 IPR010402 GO:0005515
Pte3g00733 442 MobiDBLite consensus disorder prediction 23 63 - -
Pte3g00733 442 MobiDBLite consensus disorder prediction 281 301 - -
Pte3g00733 442 MobiDBLite consensus disorder prediction 23 51 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte3g00733 Pte-Chr3 5834226 5839137 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte3g00733 313 414 C2C2-CO-like Transcription Factor Family AT1G68520 47.059 7.74e-22 95.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Pte3g00733 CCT 2.6e-18 CL0281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte3g00733 - - qsa:O6P43_022368 456.832
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte3g00733 3 5834226 5839137 Pte3g00733 3 5834226 5839137 RCT