Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte3g00718 ATGGCGGTAGATCTGGTTGCTGGTCTTTCCCGGATGGAGGATCAGTTGGCTGTTCAAGAAGCTGCGTCAGCTGGGTTGAGAAGCATGGAGCATCTCATGTCTCTTATCTCCCATCGCAACCTTGGCCATAACCAAGAGCTCCATCCCCAATCGTACCCACAGAGGGTGGACTGTGTTGAACTCGCCGACTTCACTGTCTCCAAATTCAAAAAGGTCATCCACTTATTGGACCGGACCGGTCATGCTCGCTTTCGCCGAGCTCCAGTAAATCTCCCATCTACATCTTCACAACCTGAGCCGTCAAACCAGGTACAGAAGACGAAAAACACGGGTTTCAGTCTCGATCTCGACATGGAACCTGTCCGACCGGCGGTCCAGTACCCAACTTGGACCCCGTCTCTCGATTTAGTTGCGAACAACACGATTGCGAAGTCAAATAAAAAGTCTTCTTTGGACTTGGAGCGGACCCAGTATTCCTCCTATTCTAAAGACTCGTCGTTCAATACATCCCCTCCCGTGTCATCCACGACGACATCGTCGTTTATGTCAACCATCACTGGGGACGGCAGCGTTTCAAACGGAAAGTTAGGTCCCTCCCTATTCCTTCCTCGAGCGCCACCCTTCTCCGCCGGAAAACCTCCTCTCTCCTCTTCACATCGTAAGAAATGCCATGATGCAGCTCTTGCCGCCGGGAAATCAGAAAAGGCCTTGTTTTCCAGTCGTTGCCATTGCTTAAAGAAAAGGAAATCTCGCGTGAAACGCACAATCCGAGTGCCGGCAGTGAGCGCAAAAATCGCCGATATCCCCCGGGACGAGTATTCATGGAGGAAGTACGGTCAAAAGCCGATCAAGGGTTCACCCTACCCAAGGGGTTACTACAAATGCAGTACAGTAAGAGGGTGCCCAGCAAGGAAGCACGTGGAGAGAGCACTGGACGAACCAAAAATGCTAATCGTGACGTACGAGTGTGAGCACCGGCATCCAATGGATCAAGTTACGGGAATGGGCGACGGAGATAATACCGTGGTTCTACAGAGTTTAACTTGA 1047 0.5129 MAVDLVAGLSRMEDQLAVQEAASAGLRSMEHLMSLISHRNLGHNQELHPQSYPQRVDCVELADFTVSKFKKVIHLLDRTGHARFRRAPVNLPSTSSQPEPSNQVQKTKNTGFSLDLDMEPVRPAVQYPTWTPSLDLVANNTIAKSNKKSSLDLERTQYSSYSKDSSFNTSPPVSSTTTSSFMSTITGDGSVSNGKLGPSLFLPRAPPFSAGKPPLSSSHRKKCHDAALAAGKSEKALFSSRCHCLKKRKSRVKRTIRVPAVSAKIADIPRDEYSWRKYGQKPIKGSPYPRGYYKCSTVRGCPARKHVERALDEPKMLIVTYECEHRHPMDQVTGMGDGDNTVVLQSLT* 349
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte3g00718 348 ProSiteProfiles WRKY domain profile. 264 330 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pte3g00718 348 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 15 330 IPR044810 GO:0003700
Pte3g00718 348 FunFam WRKY transcription factor 65 253 330 - -
Pte3g00718 348 Pfam Plant zinc cluster domain 220 267 IPR018872 -
Pte3g00718 348 SUPERFAMILY WRKY DNA-binding domain 267 329 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pte3g00718 348 SMART WRKY_cls 269 329 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pte3g00718 348 Gene3D WRKY domain 253 330 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pte3g00718 348 MobiDBLite consensus disorder prediction 161 181 - -
Pte3g00718 348 Pfam WRKY DNA -binding domain 271 328 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte3g00718 Pte-Chr3 5660874 5663304 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte3g00718 1 327 WRKY Transcription Factor Family AT2G24570 49.284 2.82e-88 266
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Pte3g00718 WRKY 2.9e-24 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte3g00718 - - qsa:O6P43_022388 345.125
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte3g00718 3 5660874 5663304 Pte3g00718 3 5660874 5663304 RCT