Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte3g00713 ATGGAATGTGAGAAATCATGCAACACAGGGCTTAGTCTTGATCTGGAGTTGGCAAGCTATGCTCCAAGCAAGGAGAAGCAGAAAGTAAACAAGCCTTTGGTGCGCTTGGACATGTCCTTTGAGCTTCTTCCAAAACAAGAAGCCGATAGCGTGGATTCGAACGCAGAAAATGATCAATCAAGTTTGAAGAGAAGAAGCAGCAGTAGCGATCCTGAAAACTATCAACACATCCATGATATCAATAGCAGCAATAAGAACGGCAGCAGAAAGAAATTGAGGCTAACAAAAGAACAGTCGGCTTTGCTGGAAGACAGCTTTAAGCTGCATAGCACTCTTAATACGATTCAAAAACAGTCACTAGCTGAGAAATTGAATCTAAGGCCCAGACAAGTGGAAGTCTGGTTTCAGAACAGGAGAGCAAGGTATATGTCGCAGCAAGGCTTATTCAAAACTGGAGGAAAGCATGAACAGACCAAGTTGAAGCAAACTGAGGTAGATTGTGAGTTCTTGAAGGAATGGTGCGAGAAACTGAGTGATGAGAATAAAAGGCTGAAGAAAGAATTACAAGAACTACATGCTATAAAAGTTGGGCCATCATCATTATGCATTCAACTCCCAAAGGCTGCTATGCTAACAATGTGTTCCTCATGTGACAAGCTTGTCAATGCCAACATTGAAGGGAACATTAATAGCGGAAGCATTGTTTGCAGTTTAGGATGTGGTCCGAACCAAGAATAA 738 0.4201 MECEKSCNTGLSLDLELASYAPSKEKQKVNKPLVRLDMSFELLPKQEADSVDSNAENDQSSLKRRSSSSDPENYQHIHDINSSNKNGSRKKLRLTKEQSALLEDSFKLHSTLNTIQKQSLAEKLNLRPRQVEVWFQNRRARYMSQQGLFKTGGKHEQTKLKQTEVDCEFLKEWCEKLSDENKRLKKELQELHAIKVGPSSLCIQLPKAAMLTMCSSCDKLVNANIEGNINSGSIVCSLGCGPNQE* 246
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte3g00713 245 Coils Coil 167 194 - -
Pte3g00713 245 MobiDBLite consensus disorder prediction 45 92 - -
Pte3g00713 245 SMART halz 161 204 IPR003106 GO:0006355|GO:0043565
Pte3g00713 245 Pfam Homeodomain 89 142 IPR001356 GO:0003677
Pte3g00713 245 Pfam Homeobox associated leucine zipper 161 193 IPR003106 GO:0006355|GO:0043565
Pte3g00713 245 CDD homeodomain 89 146 IPR001356 GO:0003677
Pte3g00713 245 Gene3D - 81 148 - -
Pte3g00713 245 SUPERFAMILY Homeodomain-like 68 142 IPR009057 -
Pte3g00713 245 ProSiteProfiles 'Homeobox' domain profile. 85 145 IPR001356 GO:0003677
Pte3g00713 245 SMART HOX_1 87 149 IPR001356 GO:0003677
Pte3g00713 245 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN HAT14 9 223 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte3g00713 Pte-Chr3 5643065 5644608 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte3g00713 1 220 Homeobox Transcription Factor Family AT4G37790 43.359 1.04e-49 162
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Pte3g00713 Homeodomain 3.3e-15 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte3g00713 K09338 - qsu:111997626 227.254