Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte3g00701 ATGGACAAAGTTTCTAACAGAGTCATCAAAACTGAGCAAATAACCATGGTAGAGGACGATGATGATAGTGGTCGAGCCAATTCTTGTGTTTCCTATGATTGTGTTATGGTTACTGACGCCGGCGGTGGTGAAGAAGATTGCAGAAAGGAGGTGGCGCCAGAAGGCGTGGAGGAGAAGGAAGTGACGGATGGTGTTTTCCTTGCTACAGTCAAGAAAGAGGAACCACTGGTCCTAGGCGATGTAGTGGATGGGGTGATTGGGTCTTCATCTGCATCTTCACCTGAGTTGCCTAAACCCATGGAAGGATTGCACGAGGTGGGTCCACCTCCGTTCCTAAAGAAGACGTTTGAAATGGTTGAGGACCCGGAAACTGACTTGATTGTCTCGTGGAGTGAGGGTCTGGACAGTTTCGTAGTCTGGGATTCATACGAATTTTCTAAAATTCTTCTTCCCAGATATTTCAAGCACAGCAATTTCTCCAGCTTCATTCGCCAGCTCAACACTTATGGATTTAAGAAGATTGATTCAGATCGTTGGGAGTTTGCAAATGAAGGATTTCGTGGAGGGAAGAAACATTTGTTGAAAAACATAAAAAGGAGGAGCAAGTATGATAAGTTACAGCAAGGAGGGATGATGGGTTTAATGGAACCCGGACGTGAAGCTGAGATGGAGAGATTGAGGAAGGATCACAGCATGTTGAAATTGGAAATCTTGAAGATGAGACAGAAGCAGGAGGAATCACAGACCAAAATCACAAGCATTGAGGAGAGAATTCGGTGCTCCGAGTATAAGCAACATATGCTATTCCTGACCAAAATGGCAAGAAACCCCAGCTCAGTTCAGCAATTGTGTCGAAGGATGAAGCATGGAAGGAAGGACATTGGAAAGAGGCGTAGGTTACTGTCAAACCAACAAGCTGCCAGTATGTCGAATGTCATGAATGCCACTCCAAGCGTTGATCATAGACAGCATGGACATGAAGAATTTCTGGCATTGCAATCTGTGCTCACTGGACTATATTTCGAAGATATGGACACAAGTCACTTCATCCAAAGTACACCATTATCTCCTGCCGTCAATAATCGACCCCGAAGTCCTGTACAAGTTATGAGAGCCAATGCTAGCAGAACAAGTGCAACTGATCAGTCGTCCCCATATCACGTTGTGTCCGAAAAGCTGATTGGAGAAAATTCAGTTGTTGGTGAAGAGTTATGTTTCAATGACACGAGTATCCACTTTGAGTTAGAGGATTTGATGAATCAGCCCGGTGAATGTGGTGGATTGACAAGTGGGGATATTGGGGGAAGCTGGTTGGATCGGATGATTGAGAAGCTTGAAGGCGTATGA 1347 0.4491 MDKVSNRVIKTEQITMVEDDDDSGRANSCVSYDCVMVTDAGGGEEDCRKEVAPEGVEEKEVTDGVFLATVKKEEPLVLGDVVDGVIGSSSASSPELPKPMEGLHEVGPPPFLKKTFEMVEDPETDLIVSWSEGLDSFVVWDSYEFSKILLPRYFKHSNFSSFIRQLNTYGFKKIDSDRWEFANEGFRGGKKHLLKNIKRRSKYDKLQQGGMMGLMEPGREAEMERLRKDHSMLKLEILKMRQKQEESQTKITSIEERIRCSEYKQHMLFLTKMARNPSSVQQLCRRMKHGRKDIGKRRRLLSNQQAASMSNVMNATPSVDHRQHGHEEFLALQSVLTGLYFEDMDTSHFIQSTPLSPAVNNRPRSPVQVMRANASRTSATDQSSPYHVVSEKLIGENSVVGEELCFNDTSIHFELEDLMNQPGECGGLTSGDIGGSWLDRMIEKLEGV* 449
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte3g00701 448 Gene3D - 104 201 IPR036388 -
Pte3g00701 448 PRINTS Heat shock factor (HSF) domain signature 162 174 IPR000232 GO:0003700|GO:0006355|GO:0043565
Pte3g00701 448 PRINTS Heat shock factor (HSF) domain signature 111 134 IPR000232 GO:0003700|GO:0006355|GO:0043565
Pte3g00701 448 PRINTS Heat shock factor (HSF) domain signature 149 161 IPR000232 GO:0003700|GO:0006355|GO:0043565
Pte3g00701 448 FunFam Heat shock transcription factor 1 104 201 - -
Pte3g00701 448 PANTHER HEAT SHOCK TRANSCRIPTION FACTOR 97 324 IPR027725 -
Pte3g00701 448 Pfam HSF-type DNA-binding 111 200 IPR000232 GO:0003700|GO:0006355|GO:0043565
Pte3g00701 448 ProSitePatterns HSF-type DNA-binding domain signature. 150 174 IPR000232 GO:0003700|GO:0006355|GO:0043565
Pte3g00701 448 Coils Coil 223 243 - -
Pte3g00701 448 SMART hsfneu3 107 200 IPR000232 GO:0003700|GO:0006355|GO:0043565
Pte3g00701 448 SUPERFAMILY "Winged helix" DNA-binding domain 107 200 IPR036390 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte3g00701 Pte-Chr3 5547042 5548697 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte3g00701 97 309 HSF AT2G26150 54.667 4.62e-81 252
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HSF Pte3g00701 HSF_DNA-bind 6.3e-31 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte3g00701 K09419 - qsa:O6P43_002740 390.193