Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte3g00699 ATGGAACCTCGGGTGGCCAACAAGTTTCGGCTTGGCCGGAAGATCGGTAGCGGCTCATTCGGCGAGATCTATTTAGGTACTAATATCCAGACTAACGAGGAAGTCGCGATTAAGCTTGAAAATGTCAAGACTAAGCATCCTCAGTTGCTGTATGAATCAAAATTGTACAGAATTCTTCAAGGAGGAACTGGGATTCCAAACGTTAAATGGTTTGGAGTGGAGGGAGATTACAATGTTCTGGTGATTGATCTTCTTGGTCCTAGTCTTGAAGATCTTTTTAACTTTTGCAGTAGAAAGTTGTCATTGAAGTCAGTTCTAATGTTAGCTGATCAAATGATAAATCGTGTGGAGTTTGTGCATTCTAAGTCATTTCTTCATCGTGATATTAAACCTGATAATTTTCTTATGGGTTTAGGAAGGCGTGCAAATCAGGTTTACATGATTGACTTCGGCCTGGCAAAGAAATATAGAGATAGTTCAACTCATCAACATATCCCATATAGAGAAAATAAGAACTTGACAGGGACAGCAAGATATGCAAGCATGAATACTCATCTTGGTATTGAGCAAAGCAGGAGAGATGATTTAGAGTCTCTTGGTTATGTTTTGATGTACTTTCTCAGAGGAAGTCTTCCGTGGCAGGGATTGAAAGCAGGAACCAAGAAACAGAAGTATGAGAAAATAAGTGAGAAGAAGGTTTCTACCTCTATTGAGTCTCTATGTCGGGGTTATCCAACTGAGTTTGCATCTTACTTCCATTACTGTCGATCATTGCGCTTTGATGACAAGCCAGATTATGCTTACCTTAAAAGAATATTCCGTGACCTCTTTATCCGTGAAGGTTTCCAGTTTGATTATGTATTTGATTGGACGATACTGAAGTATCAACAGTCACAGATGGCAACTCCTCCTATACGTGCACTTGGTCCTGGTGCAGGAACAAGTTCAGGAGTGCCCCTCACTGTAGCTAATGCCGATAGACAGACAGGTGGGGAGGAAAGGCGATCATCTGCTTTAGTATCAGCAGATCCCTCAAGGCGGAGAATGACAGGACCACTACTAAATTCTGGAAGACAGAAAAGTCCTGCTACCAATGCAATTGTTGCTCTGTCATCAACCTCCAATATGGTGGGTCAATCAAGTGGAGCACAAAAATTGTCTGGTATACAAGTTAGCCCAGCAGCATGTTCCTCTTCTGACCCAAGGCGGCCAGCATCATCTGGAAGATCTGCTCGGGTAAAGAATTATGATTCTGCACTAAAGGGTATGGAGAGCTTGCAATTGGACAATGATAGAGGGTTCGCCAATAAATAG 1314 0.4209 MEPRVANKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTKHPQLLYESKLYRILQGGTGIPNVKWFGVEGDYNVLVIDLLGPSLEDLFNFCSRKLSLKSVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYMIDFGLAKKYRDSSTHQHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVSTSIESLCRGYPTEFASYFHYCRSLRFDDKPDYAYLKRIFRDLFIREGFQFDYVFDWTILKYQQSQMATPPIRALGPGAGTSSGVPLTVANADRQTGGEERRSSALVSADPSRRRMTGPLLNSGRQKSPATNAIVALSSTSNMVGQSSGAQKLSGIQVSPAACSSSDPRRPASSGRSARVKNYDSALKGMESLQLDNDRGFANK* 438
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte3g00699 437 Pfam Protein kinase domain 10 227 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte3g00699 437 CDD STKc_CK1_delta_epsilon 8 282 - -
Pte3g00699 437 ProSiteProfiles Protein kinase domain profile. 9 278 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte3g00699 437 MobiDBLite consensus disorder prediction 379 413 - -
Pte3g00699 437 FunFam Casein kinase I isoform delta-like 1 308 - -
Pte3g00699 437 ProSitePatterns Protein kinases ATP-binding region signature. 15 38 IPR017441 GO:0005524
Pte3g00699 437 MobiDBLite consensus disorder prediction 310 362 - -
Pte3g00699 437 ProSitePatterns Serine/Threonine protein kinases active-site signature. 124 136 IPR008271 GO:0004672|GO:0006468
Pte3g00699 437 PANTHER CASEIN KINASE-RELATED 8 371 - -
Pte3g00699 437 SMART serkin_6 9 287 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte3g00699 437 MobiDBLite consensus disorder prediction 379 405 - -
Pte3g00699 437 SUPERFAMILY Protein kinase-like (PK-like) 6 290 IPR011009 -
Pte3g00699 437 Gene3D Transferase(Phosphotransferase) domain 1 1 306 - -
Pte3g00699 437 FunFam Putative Casein kinase I 1 85 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte3g00699 Pte-Chr3 5529714 5534446 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte3g00699 7 223 EF-hand Containing Proteins AT2G17890 26.222 1.68e-12 67.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CK1_CK1 Pte3g00699 Pkinase 3.9e-26 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte3g00699 K02218 - zju:107424125 706.827
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte3g00699 3 5529714 5534446 Pte3g00699 3 5529714 5534446 RCT