Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte3g00695 ATGGTTGTGGACATTGATATCACATGCCACGCGGAGTATAACTCTTGCCGTCCAAAATTCAAAAAATTTGGAATTCGAAGCTTTTGTTTTTTAATTGATGAAGCTGTGTTGGTGGAATGCAGAGCTGGCGAACTGTCTGCTGTTGAGCTCGACAACCTCATGACGGTTGTCGCAAATCCTAGCCAATTTAAGATTCCTGACTGGTTTTTGAACAGAAAGAAGGATTACAAGGATGAAAAATATTTTCAGGTTGTGTCCAACGCATTGGATATGAAACTGAGGGATGACCTTGAGCGTTTGAAGAAGATCATGTGGACTTTTTTTTTTCTTTACATGTTCTGA 342 0.3977 MVVDIDITCHAEYNSCRPKFKKFGIRSFCFLIDEAVLVECRAGELSAVELDNLMTVVANPSQFKIPDWFLNRKKDYKDEKYFQVVSNALDMKLRDDLERLKKIMWTFFFLYMF* 114
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte3g00695 113 PANTHER 30S RIBOSOMAL PROTEIN S13/40S RIBOSOMAL PROTEIN S18 38 103 - -
Pte3g00695 113 Gene3D 30s ribosomal protein s13, domain 2 78 105 IPR027437 -
Pte3g00695 113 Pfam Ribosomal protein S13/S18 38 103 IPR001892 GO:0003723|GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte3g00695 Pte-Chr3 5508613 5508954 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte3g00695 41 103 Cytoplasmic Ribosomal Protein Gene Family AT4G09800 88.889 6.50e-37 120
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte3g00695 K02964 - mof:131155629 120.168