Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte3g00684 ATGGACGGATGTACTGGTGAAATGGGCTTTGGTCATGCGGTGAAAATTGGGGTGTTTCTTGTGAACAGATGCAAGAAAAGAGAAAAGCGAAGATGGATTTTTAGGAAGACAACAAATCAAGAGTCAACCACCCCACCAAAGGTTAAGCCTGATTTGGCTACGGGAGGCTCTGCAAGAACAGAAGATGCATCAGTTACAGTAACCACATCATCTGCTGACCAAAAACATGCTCTTGTAGTGGCAGCGGCCACTGCTGAAGCAGCAAGGGTCACTGCTCAAGCGGCAACGGAGGTAGCCAGGATGGCGAGACCTCTTACTCGCGGTAAAGAGCAGTATGCTGCCATTGTGATTCAAACTGCTTTCAGAGGATATCTAGCAAGGAGAGCACTTCGAGCTCTTAAGGGGTTGGTAAAGCTGCAAGCTTTAGTGAGAGGGCATAATGTTAGGAAGCAAGCGAAGATGACACTTCGGTGCATGCAGGCTTTGGTTCGAGTTCAAACCCGAGTGCTTAACCAACGCATGAAATTTTCTCATGATGGCAGTAGAAAATCTGCATTCAGTGACACCAATAGTTTCTTGGAATCGCGTTATCTTCAGGATATATCAGATAGAAAATCATTATCAAGAGAGGGTAGCAGCATTGCAGATGACTGGGATAAACGCAAGCTGCTAGATGGATGA 681 0.4611 MDGCTGEMGFGHAVKIGVFLVNRCKKREKRRWIFRKTTNQESTTPPKVKPDLATGGSARTEDASVTVTTSSADQKHALVVAAATAEAARVTAQAATEVARMARPLTRGKEQYAAIVIQTAFRGYLARRALRALKGLVKLQALVRGHNVRKQAKMTLRCMQALVRVQTRVLNQRMKFSHDGSRKSAFSDTNSFLESRYLQDISDRKSLSREGSSIADDWDKRKLLDG* 227
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte3g00684 226 PANTHER IQ-DOMAIN 5-RELATED 26 188 - -
Pte3g00684 226 Gene3D - 109 162 - -
Pte3g00684 226 ProSiteProfiles IQ motif profile. 134 161 IPR000048 GO:0005515
Pte3g00684 226 SMART iq_5 132 153 IPR000048 GO:0005515
Pte3g00684 226 SMART iq_5 109 131 IPR000048 GO:0005515
Pte3g00684 226 FunFam IQ-domain 11 109 160 - -
Pte3g00684 226 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 109 155 IPR027417 -
Pte3g00684 226 ProSiteProfiles IQ motif profile. 110 138 IPR000048 GO:0005515
Pte3g00684 226 Pfam IQ calmodulin-binding motif 137 153 IPR000048 GO:0005515
Pte3g00684 226 Pfam IQ calmodulin-binding motif 113 131 IPR000048 GO:0005515
Pte3g00684 226 MobiDBLite consensus disorder prediction 36 61 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte3g00684 Pte-Chr3 5411172 5412431 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte3g00684 30 221 IQD Protein Family AT4G00820 62.121 1.52e-72 228
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte3g00684 - - qsa:O6P43_018534 261.536