Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte3g00683 ATGCTGACGTGCATAGCTCGTCCAAAAAATCTGGGAAACGGTTCTCCGGGTCAACCCGACGAGTCCGATTCATCCACCACCAAAAACAACCAAGCCGTCAAATCCCTCACTTCTCAGCTCAAGGATATGGCGCTGAAAGCGTCAGGCGCATACAAGAACTGCAGTACTTGCACCGGGCCAGCTGGTCAAGGTCGAATCAGGAGCCAAACGGAGTCGGACGCAGACTCCGATCGGTTCAGATGGTCGTATAAGCGGAGCGGGAGCTCAAGCTCCACGACGACGAGGACTTGGGGGAAAGAGATGGAGGCGAGGCTGAAAGGCATTTCAAGTGGAGAAGGCACGCCGAGCTCGGCTTCAGCTAGTGGACGGCGAGTCGAGCCCATTGTGCTTTTCGTGGAAGAGAAAGAACCGAAAGAATGGGTTGCACAAGTGGAAGCCGGCGTTCTCATCACCTTCATCTCACTCCCGCGTGGCGGGAACGATCTCAAGCGAATCCGATTCAGTCGTGATATGTTCAACAAATGTCAAGCTCAAAAGTGGTGGACTGAGAACTATGACAAGATCATGGAACTTTACAATGTACAGAGGCTTCATCGTCAAGCTTTCCCTCTTCCAATAACCTCAAGATCTGAAGATGAGAGCTCAAAGATTGAATCAGCTGAAGCCAGTACTCCCGCAACACCTCCCCTAACTAAAGAGTGCTTACCACGCAATCTGCTCCGTCCAAATGGGTTGGGAGTGGGATATTCATCTTCAGATTCGTTTGACCATCGCTCTATGTCGCGCCATTATTTTGATTCAGGTGGTCTAAACTCAACGCCAAAAGTCTCCAACATTAGTGGGGCCAAGACAGAGATATCGTCAATGGATGCGTCAATCACAAGTAGCTCTTCAAGGGATGCTGACCGCTCAGGAGAGCTATCCATCAGCAATGCCAGTGACCTTGAAACTGAATGGGTTGAACAAGACGAACCTGGGGTTTACATTACAATCAGAGCCCTTCCAGGTGGCAAAAGGGAGCTCAGAAGAGTTAGGTTCAGAGTAGTTAATCAAATCAATGTCCAGATAGGTGCTACTGGCACCTTCTGGCTAATTTTGGCTGCAAATATGGGGTGA 1116 0.5 MLTCIARPKNLGNGSPGQPDESDSSTTKNNQAVKSLTSQLKDMALKASGAYKNCSTCTGPAGQGRIRSQTESDADSDRFRWSYKRSGSSSSTTTRTWGKEMEARLKGISSGEGTPSSASASGRRVEPIVLFVEEKEPKEWVAQVEAGVLITFISLPRGGNDLKRIRFSRDMFNKCQAQKWWTENYDKIMELYNVQRLHRQAFPLPITSRSEDESSKIESAEASTPATPPLTKECLPRNLLRPNGLGVGYSSSDSFDHRSMSRHYFDSGGLNSTPKVSNISGAKTEISSMDASITSSSSRDADRSGELSISNASDLETEWVEQDEPGVYITIRALPGGKRELRRVRFRVVNQINVQIGATGTFWLILAANMG* 372
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte3g00683 371 Pfam Transcription factor regulating root and shoot growth via Pin3 316 346 IPR013591 -
Pte3g00683 371 Pfam Transcription factor regulating root and shoot growth via Pin3 138 192 IPR013591 -
Pte3g00683 371 MobiDBLite consensus disorder prediction 54 77 - -
Pte3g00683 371 ProSiteProfiles BRX domain profile. 317 371 IPR013591 -
Pte3g00683 371 MobiDBLite consensus disorder prediction 288 308 - -
Pte3g00683 371 ProSiteProfiles BRX domain profile. 138 193 IPR013591 -
Pte3g00683 371 PANTHER PROTEIN BREVIS RADIX-LIKE 1 1 347 IPR044532 -
Pte3g00683 371 MobiDBLite consensus disorder prediction 207 235 - -
Pte3g00683 371 MobiDBLite consensus disorder prediction 54 69 - -
Pte3g00683 371 MobiDBLite consensus disorder prediction 1 39 - -
Pte3g00683 371 MobiDBLite consensus disorder prediction 15 39 - -
Pte3g00683 371 Pfam Transcription factor BRX N-terminal domain 24 57 IPR027988 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte3g00683 Pte-Chr3 5405985 5410775 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte3g00683 1 346 Major Intrinsic Protein MIP AT1G31880 42.424 5.86e-71 224
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte3g00683 - - gmx:100794109 509.605
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte3g00683 3 5405985 5410775 Pte3g00683 3 5405985 5410775 RCT