Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte3g00664 ATGAAGTTCACATGGAAGGCTATCTTTCCAAGCAGCTGTTGCACGGGCCAGCATCTTTCAGCGAAGCCCAAGAGGGTTGTCGCACAAACCTCATTTAGGAGGATTTCCATATCAGATTGGAGTAATCAAAGCTTGACAATAACAGAGGATCTCTCAGTCTCTCTTGCAGGGTCAAATCTTTATGTATTTACACTTGCAGAACTTAAGGTGATCACTAATAATTTCTCATCAAGTAACTTTCTTGGAGAAGGTGGATTTGGACCAGTGCATAAGGGTTTCATTGATGACAAGCTTATGCCTGGTTTGAAGGCTCAGCCTGTTGCTATTAAGCTTCTGGACTTGGAAGGTTCACAAGGGCATAAAGAGTGGTTGACTGAGGTGATTTGTCTTGGGCAACTGAGGCATGAAAACCTTGTCAAACTGATAGGATATTGTTGCGAAGAGGAGCATAGGTTATTAGTTTATGAGTACATGCCAAGAGGCAGCTTGGAAAATCAGCTATTCAGAAGATACACTGCATCCTTACCTTGGTATACAAGAATGAAAATCGCTCTTGGAGCTGCCAAGGGGCTAGCTTTCCTTCATGATGCAGACAAACCAGTTATATATAGAGACTTCAAAGCTTCAAACATCTTGTTAGATTCTGACTACACTGCCAAACTATCAGACTTTGGTTTGGCAAAAGATGGACCAGAAGGAGATGACACTCATGTCTCAACCCGTGTGATGGGTACACAAGGCTATGCTGCACCTGAATACGTTATGACAGGACACTTGACAGCAATGAGCGATGTGTATAGCTTTGGAGTTGTTCTGTTGGAGTTACTCACGGGTAGAAGGTCTATGGACAAAAGCCGCCCTACCAGGGAGCAAAATTTAGCAGAGTGGGCAAGGCCAATGTTGAATGATCCTCGTAAAATGGGTCGGATAATGGATCCAAGACTTGAATATCAGTATTCTGAAATGGGGTCTAGAAAGGTAGCTGCATTGGCTTACCAATGTGTTAGCCATAAGGCAAAGAATAGACCCACTATGAGTACTGTGGTAAACATTTTAGAGACGCTTCAAGATGATGAGATCCCAATTAGACCCTTTGTGTATGTAGTTCCAGCTGATTCTGATTTGCAGAATGAAAGGAGATCCCCAAAGTCACCACAGAAAGTATTGAAAAAGGAAAATGGCCATCGTCACCAGAATCATCATTTGCACCATGTTCATAGGAATGAAAGAAGATCCCCTAATTCCCCAAAGTCTTCTAAACTCTACTCACCATAG 1275 0.4267 MKFTWKAIFPSSCCTGQHLSAKPKRVVAQTSFRRISISDWSNQSLTITEDLSVSLAGSNLYVFTLAELKVITNNFSSSNFLGEGGFGPVHKGFIDDKLMPGLKAQPVAIKLLDLEGSQGHKEWLTEVICLGQLRHENLVKLIGYCCEEEHRLLVYEYMPRGSLENQLFRRYTASLPWYTRMKIALGAAKGLAFLHDADKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGDDTHVSTRVMGTQGYAAPEYVMTGHLTAMSDVYSFGVVLLELLTGRRSMDKSRPTREQNLAEWARPMLNDPRKMGRIMDPRLEYQYSEMGSRKVAALAYQCVSHKAKNRPTMSTVVNILETLQDDEIPIRPFVYVVPADSDLQNERRSPKSPQKVLKKENGHRHQNHHLHHVHRNERRSPNSPKSSKLYSP* 425
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte3g00664 424 ProSiteProfiles Protein kinase domain profile. 75 366 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte3g00664 424 Pfam Protein tyrosine and serine/threonine kinase 79 352 IPR001245 GO:0004672|GO:0006468
Pte3g00664 424 FunFam Serine/threonine-protein kinase BIK1 42 157 - -
Pte3g00664 424 FunFam Probable serine/threonine-protein kinase PBL8 158 366 - -
Pte3g00664 424 CDD STKc_IRAK 81 355 - -
Pte3g00664 424 SUPERFAMILY Protein kinase-like (PK-like) 52 355 IPR011009 -
Pte3g00664 424 Gene3D Phosphorylase Kinase; domain 1 36 157 - -
Pte3g00664 424 ProSitePatterns Serine/Threonine protein kinases active-site signature. 201 213 IPR008271 GO:0004672|GO:0006468
Pte3g00664 424 MobiDBLite consensus disorder prediction 393 408 - -
Pte3g00664 424 MobiDBLite consensus disorder prediction 374 424 - -
Pte3g00664 424 MobiDBLite consensus disorder prediction 376 392 - -
Pte3g00664 424 PANTHER OS01G0588500 PROTEIN-RELATED 54 356 - -
Pte3g00664 424 Gene3D Transferase(Phosphotransferase) domain 1 158 362 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte3g00664 Pte-Chr3 5268894 5270871 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte3g00664 62 352 Glycoside Hydrolase AT3G07070 53.401 1.66e-100 304
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Pte3g00664 PK_Tyr_Ser-Thr 2.3e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte3g00664 - - cave:132165293 634.409