Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte3g00654 ATGGCCGCTGTTCAGGTTTTCCTCTTTCACCTTCTTGTTTTCCTTCAGCTATTCTGTCCACGTCCATGTTTCTCGTTAACAGAAAAGGATGCTCTTCTCAAGCTCAAGGATTCTCTCTCAAATGCTGGTGCTTTATCAAACTGGAAACCAAACTCTTCACCATGCAAGGACAATTGGGTTGGTGTAGTTTGCGTCAACAATGACATCTCAGGTCTACGTCTCAATGCCATGGATCTATCAGGAAAGATAGACCCCGAAGCTTTGCTTCACATACCTACCCTTCGAATCATTAGCTTTGAGAACAACTCTTTCACGGGTCCAATTCCAGATTTCAGCAGATTGGGTGCTTTGAAGGCTATATTTTTAACAGGGAATCAATTCTCAGGCACCATACCTAAAGAATTCTTCTCTCAGTTAGGTTCCTTGAAGAAACTCTCGCTGTCTGCTAACAAGTTTGAAGGTCCCATACCAGATTCCTTAACCAAAGTACCTAATCTGCTAGAATTGCACCTTGAAGACAATGGTTTCACAGGACCTATCCCACAATTCAGACAACCATCATTGTCTGCGTTGGACGTGTCCAAGAACAAGCTAGAAGGTCCAATTCCAGACAGTCTGTCCAGGTTTGGAGCAAAGTATTTTGCTGATAATGAAAAGCTTTGTGGAAAGCCTCTGGGGATTGAGTGCAGAGCAATTGAAGTCGTCCCACCAAAAGATACGGCAGACACACAAAGCGGTGGTGAAAGTTCACGCAAAGCGAGTAGTCAGTCCTCCATTGCGTTCGTTTCTATCGCATTTGCAGCTGTGGTGATATTGATTGTTGCGTTTGGTTGGATGGCAAGGCACAAGGATCAGGAACAGTTTAGTGTGCTTAGGAGAGAGACCATGGAGGGTAAAAAGGTTAAAGTTCATGTCACCAGAGCCCCCAGCGAGCCTCTTCGACGGGCGCCTTCTGAGTCAGGAAGCAGAAGAGGTGGTGATTCTAGGAGAGGCCAAAGGACTGGTCTAGGTGATATTGTAATGGTGAATGACGAAAAGGGTGTGTTTGGATTGCCAGATTTGATGAAGGCAGCTGCGGAGGTTTTAGGAAATGGAGGGCTGGGTTCGTCTTATAAAGCTGTCCTGGTAAATGGGTTAAGTGTGGTTGTGAAAAGAATGAAAGAGATGAACCGAATGGGAAGAGATGGATACGATGCTGAGATGAGAAGGTTTGGAAGGTTAAGACACAATAATATTTTGACGCCTCTAGCTTTCCATTATAGAAGAGAGGAGAAGCTCTTAGTCTCAGAATACGTCCCCAAAGGCAGCTTGTTATATGTTATGCACGGTGATAGAGGAACCTTTCATTCTGATTTAAACTGGCCAACACGTTTGAAGATTGTCAAGGGAATCGCCAACGGTTTGAATTTTCTCCATACTGAATATGCTTCCTATGACCTTCCCCATGGAAACCTCAAGTCGAGCAATGTTCTTCTTGGTGAAGACTACGAGCCACTACTCAATGACTACGCCTTCCATCCACTAGCCAATCCTTCAAACGCAGTGCAGTCGATGTTTTCATTCAAAACACCAGATTACTTGCATTACCAGGAAGTTTCACACAAGACTGACGTTTATTGCTTAGGGATTCTCATTCTTGAAATCCTCACAGGAAAACTTCCTTCTCAATATTTAGTCAATGGGAAAGGTGGGACAGATGTTGTGCAATTGGTTCACAGAGCTATTTCAGAGAAAAGAGAAGCGGAAGTGATTGATCCCCAGATAGCAAAAGACACAAATTCATTAAATAAAATTATGCAACTCCTCCAGATTGGGGCTGCTTGCTCTGAAAGCAATCCCGAACAACGTTTGACTATGCAAGAAGCCATTAGAAGGATAGAGGAGGTAAATGTATAA 1896 0.4378 MAAVQVFLFHLLVFLQLFCPRPCFSLTEKDALLKLKDSLSNAGALSNWKPNSSPCKDNWVGVVCVNNDISGLRLNAMDLSGKIDPEALLHIPTLRIISFENNSFTGPIPDFSRLGALKAIFLTGNQFSGTIPKEFFSQLGSLKKLSLSANKFEGPIPDSLTKVPNLLELHLEDNGFTGPIPQFRQPSLSALDVSKNKLEGPIPDSLSRFGAKYFADNEKLCGKPLGIECRAIEVVPPKDTADTQSGGESSRKASSQSSIAFVSIAFAAVVILIVAFGWMARHKDQEQFSVLRRETMEGKKVKVHVTRAPSEPLRRAPSESGSRRGGDSRRGQRTGLGDIVMVNDEKGVFGLPDLMKAAAEVLGNGGLGSSYKAVLVNGLSVVVKRMKEMNRMGRDGYDAEMRRFGRLRHNNILTPLAFHYRREEKLLVSEYVPKGSLLYVMHGDRGTFHSDLNWPTRLKIVKGIANGLNFLHTEYASYDLPHGNLKSSNVLLGEDYEPLLNDYAFHPLANPSNAVQSMFSFKTPDYLHYQEVSHKTDVYCLGILILEILTGKLPSQYLVNGKGGTDVVQLVHRAISEKREAEVIDPQIAKDTNSLNKIMQLLQIGAACSESNPEQRLTMQEAIRRIEEVNV* 632
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte3g00654 631 Gene3D Transferase(Phosphotransferase) domain 1 432 631 - -
Pte3g00654 631 Gene3D Ribonuclease Inhibitor 138 231 IPR032675 -
Pte3g00654 631 FunFam Nuclear pore complex protein NUP107 25 182 - -
Pte3g00654 631 Pfam Protein kinase domain 360 624 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte3g00654 631 SUPERFAMILY Protein kinase-like (PK-like) 360 626 IPR011009 -
Pte3g00654 631 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 13 630 IPR046959 -
Pte3g00654 631 MobiDBLite consensus disorder prediction 317 331 - -
Pte3g00654 631 Gene3D Ribonuclease Inhibitor 27 137 IPR032675 -
Pte3g00654 631 MobiDBLite consensus disorder prediction 299 336 - -
Pte3g00654 631 SUPERFAMILY L domain-like 48 208 - -
Pte3g00654 631 ProSiteProfiles Protein kinase domain profile. 356 631 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte3g00654 631 Gene3D Phosphorylase Kinase; domain 1 332 431 - -
Pte3g00654 631 Pfam Leucine rich repeat N-terminal domain 27 64 IPR013210 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte3g00654 Pte-Chr3 5201480 5203610 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte3g00654 26 632 Receptor kinase-like Gene Family AT5G20690 47.717 0.0 605
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Pte3g00654 Pkinase 1.6e-25 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte3g00654 - - qsa:O6P43_022510 712.99