Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte3g00652 ATGTCTAACTCATCGGAGTTTTCAAGCCTGACGGCGAAGTCAGCGGAGAAGCGTTCAACTTTCTCGCAAACGTGTAGTTTGTTGAGTCAGTATCTCAAAGAGAAATGCAGTTTTGGAGATCTGAACCTTGGGATGACATGCAACGCTGATACGCACGGTTCATCAGAGATGTTTCGTCAGAGATTGACTACTACTATGAATTTGTTTCCGTTGGCGGACAAATCTGGCAATATGTCAACCGAAGATACCATGACCACCACACCACAATCATGGAATCTTACATCTATGAATTTATTACCTCAGAAAACTGCTCCTAGTCCATTCTTGTCAGAAGAAAATATTCCAGAGATGGCCTATGCCAATTCAAGTGTTTTCTATAATACTGCAGCTGAAGAGAACAAAACCCCGCAAATGACAATCTTCTACGCTGGTCAAGTGCATGTGTTTGATGATTTTCCAGCAGACAAAGTTAAGGATGTAATGTCATTGGCCACTAAAAGTTGTTTCCAAAGCGACCAACAGTCAGTTGCTCCTAAAATGGTGCCAAGTCCAGTGAATCCTAGCAGCCCAATTTGTACAAATATGAACATTACTCCGTCAGCTACCAACAATTTGATCCCAGATCGTAGTCAAAATCAACCAACTATACCTGTCGTTCGCGATCTACCTATTGCTAGAAAAGCTTCCCTTCATCGATTCTTGGAAAAGAGAAAAGATAGAATTGCCTCAAAAGCACCGTATCAGACAAGCAGCCCAGTCTCCGTGTCAGGTCCTGCAAAGGCTGCAGCAGAAGGCAAACCATGGCTTGGTTTGGCTGCTCAAGCACAACAATGA 834 0.4317 MSNSSEFSSLTAKSAEKRSTFSQTCSLLSQYLKEKCSFGDLNLGMTCNADTHGSSEMFRQRLTTTMNLFPLADKSGNMSTEDTMTTTPQSWNLTSMNLLPQKTAPSPFLSEENIPEMAYANSSVFYNTAAEENKTPQMTIFYAGQVHVFDDFPADKVKDVMSLATKSCFQSDQQSVAPKMVPSPVNPSSPICTNMNITPSATNNLIPDRSQNQPTIPVVRDLPIARKASLHRFLEKRKDRIASKAPYQTSSPVSVSGPAKAAAEGKPWLGLAAQAQQ* 278
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte3g00652 277 Pfam Jas motif 223 248 IPR018467 -
Pte3g00652 277 PANTHER PROTEIN TIFY 4A-RELATED-RELATED 12 253 IPR040390 -
Pte3g00652 277 MobiDBLite consensus disorder prediction 239 261 - -
Pte3g00652 277 ProSiteProfiles Tify domain profile. 131 166 IPR010399 -
Pte3g00652 277 SMART tify_2 131 166 IPR010399 -
Pte3g00652 277 Pfam tify domain 134 164 IPR010399 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte3g00652 Pte-Chr3 5183212 5186575 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte3g00652 1 274 Tify Gene Family AT1G19180 41.667 2.27e-47 157
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Tify Pte3g00652 tify 5.3e-17 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte3g00652 K13464 - qsa:O6P43_002641 254.988
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte3g00652 3 5183212 5186575 Pte3g00652 3 5183212 5186575 RCT