Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte3g00645 ATGAAGGCTCCTTCCAATGGCTTCTTGCCAAATTCCGTCGACGGAGAACGAAAGACCATTAATTCAGAATTATGGCACGCGTGTGCCGGACCACTGGTTTCCTTGCCACCTGTAGGAAGTCTTGTTGTTTACTTCCCTCAAGGACACAGTGAGCAAGTTGCAGCATCTATGCACAAGGAGACTGATTTCGTACCCAGCTACCCTAACCTCCCTTCCAAGTTAATTTGCATGCTTCACAACGTCACGTTACATGCGGATACTGAAACAGATGAGGTCTATGCACAGATGACACTTCAACCTGTAAACAAATATGACAAAGAAGCGTTATTGGCATCTGACATGGGCCTTAAGCAAACCAGACAACCTGCTGAATTTTTCTGTAAAACCCTCACTGCTAGCGACACAAGCACTCACGGTGGATTCTCTGTGCCTCGCAGAGCAGCAGAGAAGATCTTCCCACCTCTAGACTTCTCAATGCAACCCCCTGCTCAAGAGATAGTAGCTAAAGATTTGCATGATAATACGTGGACATTCCGCCATATTTATCGCGGCCAACCAAAAAGGCACCTGCTGACCACTGGCTGGAGTGTCTTTGTTAGCACAAAAAGATTGTTTGCTGGAGATTCTGTTCTCTTTATTAGAGATGAAAAGTCACAACTCCTTTTGGGTATAAGGCGCGCTAATAGACAGCAGCCAGCTCTCTCCTCATCAGTAATTTCAAGTGACAGCATGCACATCGGTATTCTTGCCGCTGCTGCACATGCTGCAGCAAATAGTAGCCCTTTTACTATCTTCTACAATCCAAGGGCCAGCCCTTCAGAGTTTGTGATTCCACTGGCAAAATATAATAAAGCTATGTATACGCAAGTTTCCCTTGGAATGAGATTCAGAATGATGTTTGAGACGGAGGAATCTGGCGTTCGCAGATACATGGGTACGATAACTGGCATTGCTGACTTGGATCCTGTTAGGTGGAAGAATTCACAATGGCGGAATCTTCAAGTTGGTTGGGATGAATCGACGGCTGGTGACCGACCCAGCAAGGTATCACTTTGGGAGATAGAGCCCGTCGTCACTCCATTCTACATTTGTCCACCTCCATTCTTTAGACCCAAGTTTCCTAGGCAACCGGGAATGCCAGATGATGAGTCTGATATTGAGAATGCTTTCAAAAGAGCTATACCATGGATGGGAGATGACTTTGGCATGAAGGATGCTTCAAATTCAATATTTCCAGGTTTAAGTTTAGTGCAGTGGATGAGCATGCAGCAGAATAACCAGCTTTCTCCAGCTTCTCAATCGGGAATGTTTCCGTCCGTGTTTTCAGCGAACTCTGTGCATAACAGTCTCAGCAATGATGACCCGTCCAAATTATTAAGTTTTCAAGCTCCAATCATGTCTACACCGAGTCTGCAATATAAAGCAAATCCACAAAACCAAGTCAGTCAGTTGCAACAGCCACCTGTTACCTGGCCCCAACAGCAACAGATGCAGCCATTGTTCCAAAGTCCTGTCAACCAGTTGCAGCAGCAAAGACAGCAGCAGCAGCAACCAAATGCTCAGGAACCAATAAACATGCAACAGCAGCTGCAGTTAACTCAACAGCAGCCGCAGTTAACTCAACAGCAGCACCAGCTACATCAACAACGACAACAGCAGCAGCAGCAGAAACAATTAGGTCTACAGCCTCCTGCAAATAATGTAGTTGCTTCTAACCTCATTTCAGGTCAAAGCATGCAGCAGCCAGTACAATACTCTCAGTTTCAGCATCAACATTCACTGGCAGGCAGCATCTCACCGCAGCAGGGTGTGCATTCTGCTAGCAAAACTTCATTTCCTTTTACGTCCTTGCCTCACGATTCACATTTACAGCAACAGATAGAGCAAACACCTGCCCTGTTACAACGGCAGCAGCAACAGCAAGCGCAACAGACACAATTGCAGCAGTCCTCGTTACAGTTGTTGCAACAAAGTCTGTCTCAGAAGGCCCTTCAGCAACAGCAAGTGCCACAACTGTCACAGCAAAACCTGTCCGAGCAGCAACTGCAGTTGCAGTTACTGCAAAAACTGCAGCAGCAGCAACAACAACACCAACACCAGCAACCACATTTACTTTCCCCAACTAGCCCATTGTTGCAGCCTCAGTTGCTCCAACAACAGCTTGCAAATCAACAAAATCAATCGCAACAGGTCCCTTTGTCTCAGCATCAGTCACAACAGCTCCCCAGGGATGGTTTCTCAACCGAAAAGCTTCTCAATGGTAACAGCTTCTCGTCTTCAGCACTGATCCAATCACAACAATTCCCAGTTAACCAACCTCAAAGTATGCATAAACCACTGACAATAACAAGAGTTCCTTCTGGTCTCACAGATGGCGATGCTCCATCATGCTCTACATCACCATCAACTAATAATTGCCAGGTATCCCCTCCGAACCTCCTGAATAGGAATATGCAAGGGACACCCTTATTAGGGGGAAATACTGCAGTGCAGCCCACGAATAACATGGTGCAGGAGCTTCAATCCAAATCTGATGTACGGATCAAACATGAGTTGCCCATTGCAAAAGGGCCTGAGCAAATAAAGTTCAAAGGAGCCATCACAGATCAATTGGAAGCTTCTTCTTCTGGAACATCATATTGTCTCGATCCTGGTAACATCCCCCAGAGTTTCCCAATGCCAGCCTTCTGTATGGATGGCGATGTCCAGTCTCACCCTCGGAGTAATATTCCACTTTCTACTAATCTCGATGGATTGACAGCTGACACTTTGCTTTCGAGGGGATATGACTCTCAGAAAGACCTGCAAAATTTGCTTTCTAACTACGGTGGTGCTCCAAGGGATATTGAGACTGAGCTTTCCACTGCTGCTATCAGTTCTCAGTCATTTGGGGTCCCTGATATGCCTTTTAAACCTGGTTGCTCCAATGATGTTGCAATTAATGATACTGGCATACTGAATAACGGGTTGTGGACCAACCAGGCCCAACGCATGCGAACATTTACCAAGGTGCAAAAACGAGGGTCTGTAGGAAGATGTATTGATGTTACCCGTTACAAGGGATATGATGAACTTCGGCATGATTTAGCTCGTATGTTTGGGATTGAAGGGCAGCTAGAAGATCCTCAGAGGACTGACTGGAAGTTGGTCTATGTAGATCATGAAAATGATATACTTCTTGTTGGGGATGACCCTTGGGAAGAGTTCGTGAGTTGTGTGCAGAGCATAAAGATTTTGTCATCTGTGGAAGTGCAGCAGATGAGCTTAGATGGAGACCTGGGCAACGTCCCTATTCCCAATCAAACTTGTAGTGGAGCGGATAGTGAAAATATATGGAGGGCACAGTACGATGATAATTCTGCTGCCTCCTTTAATCGCTAG 3381 0.4599 MKAPSNGFLPNSVDGERKTINSELWHACAGPLVSLPPVGSLVVYFPQGHSEQVAASMHKETDFVPSYPNLPSKLICMLHNVTLHADTETDEVYAQMTLQPVNKYDKEALLASDMGLKQTRQPAEFFCKTLTASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQEIVAKDLHDNTWTFRHIYRGQPKRHLLTTGWSVFVSTKRLFAGDSVLFIRDEKSQLLLGIRRANRQQPALSSSVISSDSMHIGILAAAAHAAANSSPFTIFYNPRASPSEFVIPLAKYNKAMYTQVSLGMRFRMMFETEESGVRRYMGTITGIADLDPVRWKNSQWRNLQVGWDESTAGDRPSKVSLWEIEPVVTPFYICPPPFFRPKFPRQPGMPDDESDIENAFKRAIPWMGDDFGMKDASNSIFPGLSLVQWMSMQQNNQLSPASQSGMFPSVFSANSVHNSLSNDDPSKLLSFQAPIMSTPSLQYKANPQNQVSQLQQPPVTWPQQQQMQPLFQSPVNQLQQQRQQQQQPNAQEPINMQQQLQLTQQQPQLTQQQHQLHQQRQQQQQQKQLGLQPPANNVVASNLISGQSMQQPVQYSQFQHQHSLAGSISPQQGVHSASKTSFPFTSLPHDSHLQQQIEQTPALLQRQQQQQAQQTQLQQSSLQLLQQSLSQKALQQQQVPQLSQQNLSEQQLQLQLLQKLQQQQQQHQHQQPHLLSPTSPLLQPQLLQQQLANQQNQSQQVPLSQHQSQQLPRDGFSTEKLLNGNSFSSSALIQSQQFPVNQPQSMHKPLTITRVPSGLTDGDAPSCSTSPSTNNCQVSPPNLLNRNMQGTPLLGGNTAVQPTNNMVQELQSKSDVRIKHELPIAKGPEQIKFKGAITDQLEASSSGTSYCLDPGNIPQSFPMPAFCMDGDVQSHPRSNIPLSTNLDGLTADTLLSRGYDSQKDLQNLLSNYGGAPRDIETELSTAAISSQSFGVPDMPFKPGCSNDVAINDTGILNNGLWTNQAQRMRTFTKVQKRGSVGRCIDVTRYKGYDELRHDLARMFGIEGQLEDPQRTDWKLVYVDHENDILLVGDDPWEEFVSCVQSIKILSSVEVQQMSLDGDLGNVPIPNQTCSGADSENIWRAQYDDNSAASFNR* 1127
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte3g00645 1126 MobiDBLite consensus disorder prediction 720 753 - -
Pte3g00645 1126 ProSiteProfiles PB1 domain profile. 999 1092 IPR000270 GO:0005515
Pte3g00645 1126 FunFam Auxin response factor 289 361 - -
Pte3g00645 1126 CDD B3_DNA 125 226 IPR003340 GO:0003677
Pte3g00645 1126 MobiDBLite consensus disorder prediction 530 562 - -
Pte3g00645 1126 Gene3D - 124 227 IPR015300 -
Pte3g00645 1126 Pfam AUX/IAA family 996 1085 IPR033389 -
Pte3g00645 1126 Gene3D - 994 1088 - -
Pte3g00645 1126 MobiDBLite consensus disorder prediction 476 495 - -
Pte3g00645 1126 Pfam Auxin response factor 252 334 IPR010525 GO:0003677|GO:0005634|GO:0006355|GO:0009725
Pte3g00645 1126 FunFam Auxin response factor 994 1088 - -
Pte3g00645 1126 MobiDBLite consensus disorder prediction 581 624 - -
Pte3g00645 1126 Pfam B3 DNA binding domain 126 227 IPR003340 GO:0003677
Pte3g00645 1126 Gene3D - 289 360 - -
Pte3g00645 1126 PANTHER AUXIN RESPONSE FACTOR 4-RELATED 16 1088 IPR044835 GO:0003677|GO:0006355|GO:0009725
Pte3g00645 1126 SMART B3_2 126 228 IPR003340 GO:0003677
Pte3g00645 1126 SUPERFAMILY CAD & PB1 domains 1013 1077 - -
Pte3g00645 1126 SUPERFAMILY DNA-binding pseudobarrel domain 116 255 IPR015300 -
Pte3g00645 1126 FunFam Auxin response factor 124 228 - -
Pte3g00645 1126 MobiDBLite consensus disorder prediction 792 811 - -
Pte3g00645 1126 ProSiteProfiles B3 DNA-binding domain profile. 126 228 IPR003340 GO:0003677
Pte3g00645 1126 MobiDBLite consensus disorder prediction 783 811 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte3g00645 Pte-Chr3 5123549 5130314 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte3g00645 1 486 B3 DNA Binding Superfamily AT1G19220 83.778 0.0 841
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3-ARF Pte3g00645 AUX_IAA 4.2e-09 CL0072
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte3g00645 K14486 - rcu:8259066 929.472