Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte3g00633 ATGGGAAGAGAAAGAGAAGTTGCAAGTCCCAATGCAAAGCAGCAGCAGCAGGCATACACAGTGGAACAGCTAGTTTCTGTGAATCCTTACAATCCCGATATCCTTCCTGATCTTGAGAACTACGTAAATGATCAGGTTTCTTCTCAAACATACAGTCTAGATGCAAACCTTTGCCTTCTCAGGCTTTACCAGTTTGAACCAGATAGGATGAGTTCTCAAATTGTAGCTCGCATATTGGTTAAGGCCCTCATGGCAATGCCTGCACCAGATTTCAGCTTATGTCTCTTTCTGATACCAGAACGAGTGCAAATGGAGGAGCAGTTCAAGACATTGATTGTTCTTTCACATTATTTGGAGACTGGTAGATTCTGCCAGTTTTGGGATGAAGCAGCCAAGAACCGTCATATTGTCGGAGCTGTTCCTGGTTTTGAGCAAGCAATACAAAGCTATGCAATCCATGTCCTCTCTTTGACCTACCAAAAGATTCCTAGATCCGTACTTGCTGAGGCCATCAACATCGAAGGTCTATCCTTGGATAAATTTCTTGAACACCAAGGAACCAACTATGGTTGGAGTATTGAGAAAGGGGCAGGAAGGGGACAGCTTGTTGTACTACCTCGTAATGACTTTAACAATCCAGTAATGAAGAAAAATGTTGCAGATACTATACCGTTGGAGCGCATTGCCCGTATCTTTCCCGTACTTGGCTGA 711 0.436 MGREREVASPNAKQQQQAYTVEQLVSVNPYNPDILPDLENYVNDQVSSQTYSLDANLCLLRLYQFEPDRMSSQIVARILVKALMAMPAPDFSLCLFLIPERVQMEEQFKTLIVLSHYLETGRFCQFWDEAAKNRHIVGAVPGFEQAIQSYAIHVLSLTYQKIPRSVLAEAINIEGLSLDKFLEHQGTNYGWSIEKGAGRGQLVVLPRNDFNNPVMKKNVADTIPLERIARIFPVLG* 237
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte3g00633 236 ProSiteProfiles PCI domain profile. 51 210 IPR000717 -
Pte3g00633 236 FunFam Eukaryotic translation initiation factor 3 subunit K 132 235 - -
Pte3g00633 236 Gene3D - 132 234 IPR036388 -
Pte3g00633 236 FunFam Eukaryotic translation initiation factor 3 subunit K 13 129 - -
Pte3g00633 236 Gene3D ARM repeat; domain 1 12 129 IPR016020 GO:0003743|GO:0005852|GO:0006446|GO:0043022
Pte3g00633 236 Hamap Eukaryotic translation initiation factor 3 subunit K [EIF3K]. 12 236 IPR009374 GO:0003743|GO:0005737|GO:0005852
Pte3g00633 236 SUPERFAMILY "Winged helix" DNA-binding domain 141 233 IPR036390 -
Pte3g00633 236 SUPERFAMILY ARM repeat 14 138 IPR016024 -
Pte3g00633 236 Pfam CSN8/PSMD8/EIF3K family 71 196 IPR033464 -
Pte3g00633 236 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT 11 11 233 IPR009374 GO:0003743|GO:0005737|GO:0005852
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte3g00633 Pte-Chr3 4963773 4966946 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte3g00633 6 237 Eukaryotic Initiation Factors Gene Family AT4G33250 74.138 5.53e-128 359
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte3g00633 K15028 - cpap:110812019 407.527
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte3g00633 3 4963773 4966946 Pte3g00633 3 4963773 4966946 RCT