Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte3g00628 ATGGCGTTTCAGGATTTTGATTACATTCAAGAGCGCAGGAGAGCTGAAAGGCAACAAAAGCGCAAGAAGATAATTATCATCGGTGTAGTTTCAACTATTGTCCTTGCTGGTGTTGTCGCTGCTGCTGCCTTTGCCCTTGTTCAACAACCCAAAGGTGATGACAAAATCAAAGATGATCATGATGGCAACAAAAAAGGAGGGTCGCACTCGCGTGCCTCTTCAGATCATAATAATAAAGAGATTACAACTAGCCAGAAGGCAATCAAAGCAGCTTGTAGCTCAACCAATTACAAAGACAAATGTGAGGCTACCCTCAAAGATGGTGTCAAAGCCAAGCTTAAATCTACAGAACCCAAAGATTTCATCAGGATCAGTATCAATGCAGCATCAGAAGAGGTGAGTAAGGCTTTCACTGCAAGCAAGAAGCTCAAATTCGTGACCCCAGAACAGCAGGGAGCCTTTGAAGATTGCAAAGCATTGATTGAGGATGCCAAGAAAGACTTGGAGCGTTCCATTGCACATGCTACTGAGGGTGACGTGAAGAAGCTGGCAAATAGAACTTCTGATTTCAACAGCTGGCTGAGTGCGGTGCTCACTTACCATGAGACATGTATTGATGGTTTTGCTGATGAGAAATTAAAGAGTGACTTGAGGAAGATCTTTCAATCTGTCAAAGAATCCACTAGCAATTCTCTTGCCCTTTCTACAGAAGCCCAATCCTTCCTCTCCCAACTCAATAACAATAACAAAGCCCCAGCCAAACGTAACCTATTAGCAGATATGCAAGATGGCTTTCCTCCCTGGATTCCAAACAAGGATCGCCGGCTTTTGAAGGGGAACAACAAGGACAACATGCCTACACCTAACGTCACGGTTGCAAAGGATGGCAGTGGACAGTTTGATACAATCACCAAAGCATTAGAAGCCATGCCTAAAAAATATGAAGGACGGTACGTCATTTATGTCAAGGAAGGTGTATATGACGAGATGGTCACCATTACGGCCGATATGGCTAATGTTACCATGTATGGTGAAGGATCACAGAAGAGTATTATCACTGGCAGCAAGAGTTTTGCAGATGGAACAAGAATCTTACAGACCTCAACCTTCACTGTACTTGGAAATGGTTTCTTCGGTAAAGCAATGGGGTTCCGAAACACAGCAGGTGTAGACAAGCGTCAGGCAGTGGCTGCTAGAGTTCAAGCAGATTTTACAGTGTTTTCGAACTGCAGATTCGAAGGCTACCAATACACTCTATATGCACTTGCACACAGACAATTCTACAAAAGCTGTGTCATCACAGGCACAGTTGACTTCATCGTTGGTGATGCAGTAGCGGTATTACAGAACTGTGATATTTTCGTCAGGAAACCCATGGATGACCAGTCAAACACAATCACAGCACAAGGAAGGGTTGAAGACAAACAACACACTGGATTCGTTTTGCAAAACTGCCATATCCAACCAGACGAAATTCTGACTCCGGTTAAATCCCAGGTCAAGAGTTACCTCGGTCGGCCATGGAAGGAATACTCGAGGACCATAGTCATGGAATCAACCATTGAAGATTTCATCGACCCTGAAGGATGGACACCATTCATGGGAAACTATGGAACAAAAACATGTTACTTTGGTGAATACAACAATAAAGGATCTGGTTCCAGCACTAACGATAGAGTAAAGTGGCCTTGCTTCAAGGTCCTCGAGAAGACGGATGCTGAGAAATTCACAGTGGGATCTTTCTATGAAAATAGAAAGGATTGGCTCGTTGATACAGGCGTACAAGTTAAATATGTTTTCTTTGATGGAGCGTGA 1815 0.4364 MAFQDFDYIQERRRAERQQKRKKIIIIGVVSTIVLAGVVAAAAFALVQQPKGDDKIKDDHDGNKKGGSHSRASSDHNNKEITTSQKAIKAACSSTNYKDKCEATLKDGVKAKLKSTEPKDFIRISINAASEEVSKAFTASKKLKFVTPEQQGAFEDCKALIEDAKKDLERSIAHATEGDVKKLANRTSDFNSWLSAVLTYHETCIDGFADEKLKSDLRKIFQSVKESTSNSLALSTEAQSFLSQLNNNNKAPAKRNLLADMQDGFPPWIPNKDRRLLKGNNKDNMPTPNVTVAKDGSGQFDTITKALEAMPKKYEGRYVIYVKEGVYDEMVTITADMANVTMYGEGSQKSIITGSKSFADGTRILQTSTFTVLGNGFFGKAMGFRNTAGVDKRQAVAARVQADFTVFSNCRFEGYQYTLYALAHRQFYKSCVITGTVDFIVGDAVAVLQNCDIFVRKPMDDQSNTITAQGRVEDKQHTGFVLQNCHIQPDEILTPVKSQVKSYLGRPWKEYSRTIVMESTIEDFIDPEGWTPFMGNYGTKTCYFGEYNNKGSGSSTNDRVKWPCFKVLEKTDAEKFTVGSFYENRKDWLVDTGVQVKYVFFDGA* 605
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte3g00628 604 PANTHER PECTINESTERASE 38 590 - -
Pte3g00628 604 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 85 236 IPR035513 -
Pte3g00628 604 CDD PMEI-like_3 90 237 - -
Pte3g00628 604 SMART PMEI_2 83 234 IPR006501 GO:0004857
Pte3g00628 604 Gene3D - 284 599 IPR012334 -
Pte3g00628 604 FunFam Pectinesterase 84 239 - -
Pte3g00628 604 MobiDBLite consensus disorder prediction 52 82 - -
Pte3g00628 604 Pfam Plant invertase/pectin methylesterase inhibitor 87 234 IPR006501 GO:0004857
Pte3g00628 604 NCBIfam pectinesterase inhibitor domain 83 236 IPR006501 GO:0004857
Pte3g00628 604 Gene3D Invertase/pectin methylesterase inhibitor family protein 84 238 IPR035513 -
Pte3g00628 604 MobiDBLite consensus disorder prediction 52 76 - -
Pte3g00628 604 FunFam Pectinesterase 4 286 599 - -
Pte3g00628 604 SUPERFAMILY Pectin lyase-like 286 585 IPR011050 -
Pte3g00628 604 Pfam Pectinesterase 289 582 IPR000070 GO:0030599|GO:0042545
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte3g00628 Pte-Chr3 4904915 4906979 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte3g00628 1 603 Carbohydrate Esterase AT2G26450 45.920 0.0 537
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte3g00628 - - qsa:O6P43_003780 662.914