Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte3g00622 ATGGAAGACGAGGTTGACTACGATGAGGATGTTAAGGCAGAGGTGAAGCAAGTTTCTGAGATGGAGAACCAAGACCAAATGCATGACGATTTTCCTTCTTCAAAGTCTTGCACACGTTGCAAAGCTGAGCTTGGTGACACTGAAGTTGTTAATTGCAATGGAAAGGAAGAGTTGACCTTTCCATTCGGTGTGATAGATGAGAAGAAACATGTTCCAGAGTTGTTTGGTGGGAAGTCAGTACAGGACAGAGGGGAAGATGAGAAAATGGTGCCCTTCTCTGAAACCAGGCCGGCAACAATGCAAGCATATGGACCACATGGAACCAAGAATCTCCTTACCATATTCTATGATGGGAAAGTTTGTGTTTTTGATTCCATACCTGCGGAAAAGGTACAAGAAATTCTGTTCCTTGCCAGTGCTGGTACTACTAAGCCTGCGAAAATGAATGATATTGGAACTCAAACACCTTTAGCTTCTCCTGTTCCTACAATGTCACCCTCCCCACAAACGGCAGCTCCTGCTTTGGCCCCAATGCAGGTTCTGTCTCTCACTGCTCAAGACAGTTCCCTCTGCAGGCTGCAAGAAATTCCCATTGCTAGGAGACACTCCCTTCAGCGTTTTCTTGAAAAGCGACGAGATAGATTGGCCACCAAGAGTCCCTATCATTCCCCATCAACAAAAATTGATGACAACTTAGAAAACATCCATGTTGACAAGAATTCATCTGACTCAGTCAACATCAAACAGTCCAAAGAAGAATTTCGTCCTGCGATTGTAGCATCCTACGATGTTGTCTGCTAG 801 0.4469 MEDEVDYDEDVKAEVKQVSEMENQDQMHDDFPSSKSCTRCKAELGDTEVVNCNGKEELTFPFGVIDEKKHVPELFGGKSVQDRGEDEKMVPFSETRPATMQAYGPHGTKNLLTIFYDGKVCVFDSIPAEKVQEILFLASAGTTKPAKMNDIGTQTPLASPVPTMSPSPQTAAPALAPMQVLSLTAQDSSLCRLQEIPIARRHSLQRFLEKRRDRLATKSPYHSPSTKIDDNLENIHVDKNSSDSVNIKQSKEEFRPAIVASYDVVC* 267
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte3g00622 266 Pfam tify domain 109 139 IPR010399 -
Pte3g00622 266 SMART tify_2 105 140 IPR010399 -
Pte3g00622 266 Pfam Jas motif 197 221 IPR018467 -
Pte3g00622 266 ProSiteProfiles Tify domain profile. 105 140 IPR010399 -
Pte3g00622 266 PANTHER PROTEIN TIFY 4A-RELATED-RELATED 89 226 IPR040390 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte3g00622 Pte-Chr3 4869561 4872087 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte3g00622 63 221 Tify Gene Family AT5G20900 41.463 3.31e-27 102
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Tify Pte3g00622 tify 6.9e-15 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte3g00622 K13464 - qsa:O6P43_021963 167.933