Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte3g00617 ATGGATATATACATTTGGATTCTGGCCCTCCCTACTATGCAAAAAATAACAGCAATGCCCGAGACAAATATGAATCCAGGAATTGCCAGGAAACCATTTTGGATTCTGGGGTTTGTGGGTTTAGTGCTCTGCAGCAGATTAATAGATGGTATGCAAGATGTGAATATCACAGCCACGGATTATGCCACTAGTTATGGTTTCTCAGGGACACCATTGATGGTGGGACTAACTCTTATTAATGGAGCTGCTGCCAAAGGAGCTGTATGCATGGATGGAACTCTCCCAGCTTACCATCTTCACCGTGGATATGGTTCTGGGGCTAACAGTTGGCTCGTACAACTTGAGGGAGGAGGATGGTGTGGAAGTATTAGAACTTGTCTTTACAGTAAAAAAACTCGACGTGGTTCCTCAGCGTATATGGAGAAAGAGTTGCCTTTCACTGGAATCTTGAGCAATAAAGCTGAAGAAAACCCAGATTTTTACAATTGGAATAGAGTCAAAATTCGCTACTGTGATGGAGCGTCATTCAGTGGTGAAAGTTATAATGAGGCAGCCCAGTTATACTTCCGAGGACAGCGAATCTGGTGGGCAGCAATGGAAGAATTGATGTCACAAGGAATGCGCTATGCTAAACAGGCCCTGCTATCTGGGTGTTCTGCTGGTGGTGTAGCTACTATACTGCACTGTGATGAATTCCGGGGACTATTTCATAGAACCACGAAAGTCAAGTGCCTAAGTGATGCCGGGATGTTCCTTGATGCAATTGATGTGTCTGGGAGGCGCACTCTGAGGAATATGTTTGGTGGAGTGGTTTCCTTGCAGGGAGTTCAAAAAAATCTTCCAGCAAGTTGTACCCGGCGCCTTCATCCAACCCTGTGTTTTTTCCCTCAAAACATTATTGGCAGTATACAGACCCCACTGTTTCTTGTAAATGCAGCCTATGATACTTGGCAAATTCAGGCAAGTTTAGCCCCAAATTCTGCTGACCCTCGTGGATATTGGTATGGATGCAAAAAGAACTACGCAAGTTGCACTGCACCACAGATGAGATTTCTGCAAGGTTTTCGGTATCAGATGCTTACAGCTGTTAAAGGGTTCTCGAGATCCCATAAAAATGGACTGTTCATAAATTCATGTTTTGCTCATTGCCAGACTGAAAGACAAGACACGTGGCATTCCAACCAGTCTCCTCATATAGGAAATAAGGGGATTGCAGAGTCCGTTGGAAACTGGTTCTTTGATAGAGCTCAGGTACAGGCCGTAGGATGTGCATACCCTTGCGATAGAACGTGCCATAATTTAGTATTCAATTGA 1314 0.4437 MDIYIWILALPTMQKITAMPETNMNPGIARKPFWILGFVGLVLCSRLIDGMQDVNITATDYATSYGFSGTPLMVGLTLINGAAAKGAVCMDGTLPAYHLHRGYGSGANSWLVQLEGGGWCGSIRTCLYSKKTRRGSSAYMEKELPFTGILSNKAEENPDFYNWNRVKIRYCDGASFSGESYNEAAQLYFRGQRIWWAAMEELMSQGMRYAKQALLSGCSAGGVATILHCDEFRGLFHRTTKVKCLSDAGMFLDAIDVSGRRTLRNMFGGVVSLQGVQKNLPASCTRRLHPTLCFFPQNIIGSIQTPLFLVNAAYDTWQIQASLAPNSADPRGYWYGCKKNYASCTAPQMRFLQGFRYQMLTAVKGFSRSHKNGLFINSCFAHCQTERQDTWHSNQSPHIGNKGIAESVGNWFFDRAQVQAVGCAYPCDRTCHNLVFN* 438
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte3g00617 437 PANTHER NOTUM-RELATED 72 433 IPR004963 GO:0016787
Pte3g00617 437 Pfam Pectinacetylesterase 71 417 IPR004963 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte3g00617 Pte-Chr3 4848075 4852036 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte3g00617 73 436 Carbohydrate Esterase AT1G57590 70.055 0.0 561
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte3g00617 K19882 - nnu:104585589 659.833
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte3g00617 3 4848075 4852036 Pte3g00617 3 4848075 4852036 RCT
Pte3g00617 3 4848075 4852036 Pte18g01986 18 30358043 30361832 RCT
Pte3g00617 3 4848075 4852036 Pte18g01971 18 30251699 30255841 RCT
Pte3g00617 3 4848075 4852036 Pte15g00149 15 1081267 1085937 RCT