Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte3g00605 ATGGAGAAGAAGATGGGTGTTTTCGACTGTTGCAAAAGAATTGACATTCAAAAAGATGTTGTTCAGGCACCCATGATTCCAAATAAACCTGCCGGGAGTAGTGAAGGTTATCATGTCAATGATTCTTCAAAAAGGGAAGCACAGACTATAAGGTTTGAACCTATCGCTGTACCTGCTATTACAGCAGAAGAAGTGAAGGATCTTACTGGTAATTTTGGCCCCAAAGCATTAATCGGAGAAGGTGCATATGGTAAAGTATACCATGGTGTTTTGAGGAGTGGGGGTGCTGCGGCAATCAAGAAGTTAGATGACAATAAGCAACCAGACAAGGAATTTCTAGCACAGGTCTCCATGGTATCAAGACTAAAACATGAGAATGTGGTTCAGCTTCTTGGTTATTGTGTGGAAGGCCCTCTTCGTGTCCTTGCTTATGAATATGCAACGCATGGTTCTCTTCACGATATTCTCCATGGACGAAAAGGTGTGAAAGGAGCCACCCCAGGTCCAGTTCTATCATGGGCACAGAGAGTTAAAATTGCTGTAGGTGCAGCTAAAGGACTTGAATATCTCCATGACAAAGCGGAGCCTCGAATTGTTCACCGTTATATCAAGTCCAGTAACGTACTACTTTTTGACGATGATGTTGCAAAAATTGCTGATTTTGATTTGACAAATGAGTCCCCTGACATGGCAGCACGACTTCATTCCACTCGCGTTCTTGGGACCTTTGGTTACCATGCTCCAGAATATGCAATGACAGGACAAATGAGTCCAAAGAGTGATGTTTACAGCTTTGGGGTTGTCTTGCTGGAACTTTTGACTGGCCGCAAACCTGTTGATCATACCTTGCCCCGTGGACAGCAGAGTCTTGTGACTTGGGCAACTCCAAAACTTAGTGAAGATAAGGTCAGGCAATGTGTTGATTCAAGACTAAATAGAGAATACCCTCCCAAGGCAGTTGCGAAGCTTGCTGCTGTTGCTGCATTATGTTTGCAATATGAAGCTGATTTCCGACCAAACATGAGTATCGTTGTCAAAGCTTTACAACCTCTACTGAGTTCTCGGTCATCTCACTCGTATGGTTCGCCAAGACGCTGA 1098 0.439 MEKKMGVFDCCKRIDIQKDVVQAPMIPNKPAGSSEGYHVNDSSKREAQTIRFEPIAVPAITAEEVKDLTGNFGPKALIGEGAYGKVYHGVLRSGGAAAIKKLDDNKQPDKEFLAQVSMVSRLKHENVVQLLGYCVEGPLRVLAYEYATHGSLHDILHGRKGVKGATPGPVLSWAQRVKIAVGAAKGLEYLHDKAEPRIVHRYIKSSNVLLFDDDVAKIADFDLTNESPDMAARLHSTRVLGTFGYHAPEYAMTGQMSPKSDVYSFGVVLLELLTGRKPVDHTLPRGQQSLVTWATPKLSEDKVRQCVDSRLNREYPPKAVAKLAAVAALCLQYEADFRPNMSIVVKALQPLLSSRSSHSYGSPRR* 366
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte3g00605 365 ProSitePatterns Protein kinases ATP-binding region signature. 78 101 IPR017441 GO:0005524
Pte3g00605 365 Pfam Protein tyrosine and serine/threonine kinase 77 348 IPR001245 GO:0004672|GO:0006468
Pte3g00605 365 ProSiteProfiles Protein kinase domain profile. 72 352 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte3g00605 365 Gene3D Phosphorylase Kinase; domain 1 33 146 - -
Pte3g00605 365 Gene3D Transferase(Phosphotransferase) domain 1 148 361 - -
Pte3g00605 365 SUPERFAMILY Protein kinase-like (PK-like) 48 348 IPR011009 -
Pte3g00605 365 FunFam pto-interacting protein 1 148 359 - -
Pte3g00605 365 PANTHER PTO-INTERACTING PROTEIN 1-LIKE 10 353 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte3g00605 Pte-Chr3 4775765 4779388 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte3g00605 54 349 Receptor kinase-like Gene Family AT4G02010 47.333 9.16e-85 270
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIII Pte3g00605 PK_Tyr_Ser-Thr 2e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte3g00605 K13436 - sind:105156806 556.984