Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte3g00582 ATGTCTCGTACGGATTTCAACGAGGGTGATCAAGTTGAGGTTGTGACGAAAGGGCACGATTGCTTTTACCCAGCAACTGTGTTGTGCTCACCGTCTATGCGCAAGAAGATGGTTTTTGTTGAGTACCTTGCATCAAATGGGAATGTGGATGATCCTGACAACTCTGAGCCAATGAGGTTCGTTAGAGATCATGTTGAGGTTACCCAACTGAGGCCTAAGCTTCCGTGTCAGCTGAATTATTATTTCAAAGTTGGCGACAAGGTTGATGCTTTCCTCGATAGTTCCTGGTATGCTGGTACCGTCATGGATATTTTCGAGGCCTCGAAGTATTTGATTTTGTTTGAGTCTAAAGGAGAAGAGCTTGAGGTTGAACAATATCATTTAAGGCTTCACCGAAAATGGGTTGATGGGTCTTGGGTTCCACCTCTTCCTCAATGGACGAAGGAGAAGTCATCTGCAGAATTGGATTCCAGAAAGGTGAAAATCAAGATCAAGTTCAACAAGGCAAAGTTTGAAAATGGGACGACAGTTGAAGTTACAAGTGATGAGAATGGTTATAAGGGTGCTTGGTTCATTGCAACTATTGTTGATTACTTGGGAAATGACAAGTTTATGGTTGAATACTGCAACCTAATGACAGATGATGGATCCGAGCTCTTGAGAGAGAAAGCATATTCTTATCATATTAGACCCTGTCCCCCTCAATTTCCAGTAGTTTTTCCCTTTAGGGAGCAGCAAGAGGTTGATGCTTGGTACAACGACGCATGGTGGGAAGGGGTAATTTCCAAAGTTCTGAGTAGCTCAGAGTATCTTGTGTATTTTAGACCTACAGGTGAAGTTTTAAGATTTGACATTTCGAAACTGAGAACTCATCAAGACTGGATTAACGGGGAATGGGCCTTTACATCCAAGATGTCAAATAAGCTGATGCGAAAATCTGGAAACAAAAAATGGAAGGCCAAGATAGTTAGAAATACAACGAAGACAGAGTTTTGTAAGGGACTGAAAGTAGAAGTCAAAAGTGATGAAGAAGGTTATGAGGGTTCATGGTTTACAGCCTTCATTATTGCGTCGTTGGGGAATGACAAGTACTTGGTTGAATATGAAACCCTGAAGACAGACAATGAGACGGAGCAACTTAGAGAAGAGGCCGATGCATCTGATATTAGGCCCTGTCCACCTGATATCAGTCATCCTCTCCATTTTGCACTGCACGAGCAGGTCGATGCTTGGTATAATGAAGGATGGTGGGAGGGGAAAATATCGAGTGTTCTCCATGGGGATAAGTATCGAGTTTACTTTGAAACAACAAACGAGTATCTGGAATTTGATCGCTATAATCTGAGGACTCATCAAGATTGGGTTAATGGAAAATGGGAGCTTAATAGGACCGAAGAGCCCATCAATTAA 1410 0.4227 MSRTDFNEGDQVEVVTKGHDCFYPATVLCSPSMRKKMVFVEYLASNGNVDDPDNSEPMRFVRDHVEVTQLRPKLPCQLNYYFKVGDKVDAFLDSSWYAGTVMDIFEASKYLILFESKGEELEVEQYHLRLHRKWVDGSWVPPLPQWTKEKSSAELDSRKVKIKIKFNKAKFENGTTVEVTSDENGYKGAWFIATIVDYLGNDKFMVEYCNLMTDDGSELLREKAYSYHIRPCPPQFPVVFPFREQQEVDAWYNDAWWEGVISKVLSSSEYLVYFRPTGEVLRFDISKLRTHQDWINGEWAFTSKMSNKLMRKSGNKKWKAKIVRNTTKTEFCKGLKVEVKSDEEGYEGSWFTAFIIASLGNDKYLVEYETLKTDNETEQLREEADASDIRPCPPDISHPLHFALHEQVDAWYNEGWWEGKISSVLHGDKYRVYFETTNEYLEFDRYNLRTHQDWVNGKWELNRTEEPIN* 470
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte3g00582 469 CDD Tudor_Agenet_AtDUF_rpt2_4 406 449 - -
Pte3g00582 469 CDD Tudor_Agenet_AtDUF_rpt1_3 331 394 - -
Pte3g00582 469 Pfam Agenet domain 85 145 IPR008395 -
Pte3g00582 469 Pfam Agenet domain 174 234 IPR008395 -
Pte3g00582 469 Pfam Agenet domain 9 75 IPR008395 -
Pte3g00582 469 Pfam Agenet domain 334 394 IPR008395 -
Pte3g00582 469 CDD Tudor_Agenet_AtDUF_rpt2_4 84 130 - -
Pte3g00582 469 CDD Tudor_Agenet_AtDUF_rpt2_4 246 289 - -
Pte3g00582 469 Gene3D - 321 399 - -
Pte3g00582 469 CDD Tudor_Agenet_AtDUF_rpt1_3 171 234 - -
Pte3g00582 469 PANTHER AGENET DOMAIN-CONTAINING PROTEIN-RELATED 5 157 - -
Pte3g00582 469 SMART agenet_At_2 169 237 IPR014002 -
Pte3g00582 469 SMART agenet_At_2 400 456 IPR014002 -
Pte3g00582 469 SMART agenet_At_2 80 136 IPR014002 -
Pte3g00582 469 SMART agenet_At_2 329 397 IPR014002 -
Pte3g00582 469 SMART agenet_At_2 4 78 IPR014002 -
Pte3g00582 469 SMART agenet_At_2 240 296 IPR014002 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte3g00582 Pte-Chr3 4563304 4567391 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte3g00582 340 454 PHD Transcription Factor Family AT5G58610 28.889 9.20e-11 62.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte3g00582 - - qsu:112036041 433.335