Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte3g00572 ATGGCGTCATCTCTGATCTCAAACCCTGAAGCCAACACTGATCAGTCACGTGACGCATCCAGAAGGAAGAAGAAAAAGAAAGCAACTCAGATGAAGCAACTACATCTTCAAAAGCTGCAATCACAGAATGAACAGAACCAGCAAGCCAGATGGAAATCTCAATCACAACAACAGCTCTACTCCTCTAAGCTCCTTCGAGCTCTCAACCAAGTCAGCCTTCGTGGTTCATCTCCTTCCACCGCCACAAGAGGTAATACCACTCTCAACAATCGCATTGACTCCGCGCCTCGTCGAGGTAGAGCTGTGCGTGAAGCTGCTGATAGAGTCTTAGCCGTGGCTGCTAAGGGAAGGACTAGGTGGAGCAGAGCCATTCTCACCAATCGCCTTAAGCTCAAGTTTAGGAAGCACAAGAAGCAGAAGGTTGCTACCCCACATACAACCGGGAGCAGCCGGTCAAAGAAGCCGAAAATGAGCGTCTTGCGATTGAAGGGCAAATCTTTACCGGCTGTGCAGAGAAAAGCAAGGCTTCTTGGCCGGTTGGTTCCCGGTTGTCGTAAGGAACCCTTGCCTGTGATATTGGAGGAAGCCACTGATTACATAGCCGCACTTGAGATGCAGGTTCGAGCCATGAGCGCGTTGGCTGAGTTGCTCTCTGGCTCTGCTTCTGGTGCCGGCTCTAGTTCTGCGCCGCCTAGTTGA 699 0.5122 MASSLISNPEANTDQSRDASRRKKKKKATQMKQLHLQKLQSQNEQNQQARWKSQSQQQLYSSKLLRALNQVSLRGSSPSTATRGNTTLNNRIDSAPRRGRAVREAADRVLAVAAKGRTRWSRAILTNRLKLKFRKHKKQKVATPHTTGSSRSKKPKMSVLRLKGKSLPAVQRKARLLGRLVPGCRKEPLPVILEEATDYIAALEMQVRAMSALAELLSGSASGAGSSSAPPS* 233
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte3g00572 232 MobiDBLite consensus disorder prediction 135 158 - -
Pte3g00572 232 MobiDBLite consensus disorder prediction 1 33 - -
Pte3g00572 232 MobiDBLite consensus disorder prediction 72 99 - -
Pte3g00572 232 MobiDBLite consensus disorder prediction 72 93 - -
Pte3g00572 232 PANTHER TRANSCRIPTION FACTOR IBH1-LIKE 1 53 217 IPR044660 GO:0006355
Pte3g00572 232 CDD bHLH_AtIBH1_like 159 214 IPR044549 GO:0006355
Pte3g00572 232 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 176 219 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte3g00572 Pte-Chr3 4482074 4482772 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte3g00572 50 213 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G17100 56.548 7.67e-56 176
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte3g00572 - - qsa:O6P43_003690 239.58