Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte3g00567 ATGGAGAAGAGAGAAGAGATCAAATCCACAGAGAATTTCATGGCAACCGCTACTGTATTTTCCAATGAGATTCCGATCAGTAATGTCTCTTTGTCAAGCATCTTGTACGACATGTCAAGTGATGATCAACATGAAAAGGGTCCGTTTGGGTACATGGAATGGTTGGGTGGGCAAGACTATGCTACTTCGTCTATATTCGATTGGCTTCCACTGCCCACAAACACAACCACAACTACGTCATCTTCCATGATTCTGCAGCAGATTCAGCATCCATCTCCAGTTAGCTCCACCGTGCCTGAATCTTCGGAGGTGTTGAACACCCCTACCTCCGGTAATACTTCTTCCATTTCTTCCTCTTCAAATGAAGCACCGGTAGCCAATATTGATGAGCTGCAAAGCCTTAAGAAAAATGAGAATGAGCAAGACGAACCAGAAGAAAAAGAAGAAGAAGGTGGAGAAAATCAAGACAAGAGTAAAAACCAGTTGAAACCCAAAAAGAAAAACCAAAAAAGGCAAAGAGAACCGAGATTTGCGTTCATGACAAAGACTGATATTGATCACCTTGACGATGGCTATCGGTGGCGCAAGTACGGCCAAAAAGCTGTCAAGAACAGCCCTTATCCCAGGAGCTACTATCGTTGTACCAGTGCCGGTTGCGACGTGAAGAAGAGGGTGGAGCGGTCCTCTGATGACCCTTCTATTGTCGTTACCACATACGAAGGCCAACACACGCATCCAAATCCGGTCATACCTCGGAGCTCCAGCATCGGATTCGTTCAAGAATCTAATACAGCTGGTGGATTCGGAGCCAACCCAATTCGTGCTAGTTCCGTAGCTTTATCACAACTCAATCAATTACCTCATCATCATGGTCTCTTCCAACAATACCAACAAGAAGAAGGAGCATCGAGAGCTGCAGCTTATTTATATAACTCACCACGCTCTCTGAGTTTAAGTACTTCTAGTTCAAGTGGCTTAGCTAACTCCTCCAGCTATTTTCATCAAGAGGGTAACTATACTGGTCCATCTTCATTGTCAAGTACTGGTCTGATGTTAAGGGACCATGGACTTCTTCAGGACGTTGTGCCTTCCCAGATGATCAGGAAGGATCCAAAAGAAGATCATCTGTAG 1131 0.4474 MEKREEIKSTENFMATATVFSNEIPISNVSLSSILYDMSSDDQHEKGPFGYMEWLGGQDYATSSIFDWLPLPTNTTTTTSSSMILQQIQHPSPVSSTVPESSEVLNTPTSGNTSSISSSSNEAPVANIDELQSLKKNENEQDEPEEKEEEGGENQDKSKNQLKPKKKNQKRQREPRFAFMTKTDIDHLDDGYRWRKYGQKAVKNSPYPRSYYRCTSAGCDVKKRVERSSDDPSIVVTTYEGQHTHPNPVIPRSSSIGFVQESNTAGGFGANPIRASSVALSQLNQLPHHHGLFQQYQQEEGASRAAAYLYNSPRSLSLSTSSSSGLANSSSYFHQEGNYTGPSSLSSTGLMLRDHGLLQDVVPSQMIRKDPKEDHL* 377
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte3g00567 376 SUPERFAMILY WRKY DNA-binding domain 180 248 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pte3g00567 376 FunFam WRKY transcription factor 57 174 248 - -
Pte3g00567 376 ProSiteProfiles WRKY domain profile. 183 248 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pte3g00567 376 MobiDBLite consensus disorder prediction 76 178 - -
Pte3g00567 376 Pfam WRKY DNA -binding domain 189 246 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pte3g00567 376 Gene3D WRKY domain 173 249 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pte3g00567 376 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 88 284 IPR044810 GO:0003700
Pte3g00567 376 MobiDBLite consensus disorder prediction 76 127 - -
Pte3g00567 376 SMART WRKY_cls 188 247 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte3g00567 Pte-Chr3 4451343 4453585 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte3g00567 35 370 WRKY Transcription Factor Family AT2G47260 39.548 2.72e-54 181
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Pte3g00567 WRKY 1.4e-27 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte3g00567 - - qsa:O6P43_021880 311.227
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte3g00567 3 4451343 4453585 Pte3g00567 3 4451343 4453585 RCT