Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte3g00564 ATGGCTTCGAGTTCGGTGGGAGGATCAACGTTTTCGATGGACGACTATGAGACCTTGATGGCCACGACGGATGTTGAACTACTCAAGAGAGCTTGGCGCAATGAGAAGGCGGCTCCGGAGATTCTACGTTTTGAGGTCGATCTGATTCAACGTATCAGAGGTCAGATCCAATTAATGGAAGAGACGGTGGAGGAATTTGCAAGCAGTGGAATTGATCCTCTTACAGTCTCACTCTACCAGATGGATTTGGATAGAGCACAGTTTCTATTGAGATCCTATCTCCGTATACGCATACAGAAGATTGAGAAGTACATATTTCGTATAGAGAGAACCCCTGAACTATGGAACAGGCTTTCTAAAGAAGAGAAAGGTTTCGCAAGAAGGAAAGACAATGACTTGAAACAGCATCTAGATGAAAGTGTCCTGTCGAAATTGCCTGATAATTATCAGTCCGTACAAAAGCAATCTGTAATAAGCGAAGAGGATGACATGGTACCCGAGCCACAGTTAGACGCATTCGTTGTTTGCAGAAGTAAGGAGTATCTGAGTGGCATCCAGCTTGAGGATGGACCTGTTGATGACAGATCAAAGCTCTTCGAGATGGAACCTGGCGTGCTCTACTTTATTTGTTACAAGTCTATCAAAGCACTTGTAGAGAGTGGTAAGATCGAATTAGTCTGTTGA 684 0.4401 MASSSVGGSTFSMDDYETLMATTDVELLKRAWRNEKAAPEILRFEVDLIQRIRGQIQLMEETVEEFASSGIDPLTVSLYQMDLDRAQFLLRSYLRIRIQKIEKYIFRIERTPELWNRLSKEEKGFARRKDNDLKQHLDESVLSKLPDNYQSVQKQSVISEEDDMVPEPQLDAFVVCRSKEYLSGIQLEDGPVDDRSKLFEMEPGVLYFICYKSIKALVESGKIELVC* 228
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte3g00564 227 PANTHER SLD5 PROTEIN 12 226 IPR008591 GO:0006261
Pte3g00564 227 Pfam GINS complex protein 56 123 IPR021151 -
Pte3g00564 227 SUPERFAMILY PriA/YqbF domain 170 226 - -
Pte3g00564 227 SUPERFAMILY GINS helical bundle-like 21 156 IPR036224 -
Pte3g00564 227 CDD GINS_B_Sld5 168 226 IPR031633 -
Pte3g00564 227 FunFam DNA replication complex GINS protein SLD5 10 216 - -
Pte3g00564 227 Pfam DNA replication complex GINS protein SLD5 C-terminus 168 226 IPR031633 -
Pte3g00564 227 PIRSF GINS_Sld5 1 226 IPR008591 GO:0006261
Pte3g00564 227 Gene3D - 12 216 - -
Pte3g00564 227 CDD GINS_A_Sld5 24 142 IPR038749 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte3g00564 1 164 Core DNA Replication Machinery Family AT5G49010 64.242 3.60e-68 206
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte3g00564 K10735 - qsa:O6P43_008399 383.259