Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte3g00558 ATGGGAACCCCGCCAGCAGAAGAGCTTCTAAAGAAGATCCAAGAGCTGGAAGAAGGGCATGCAACCCTCAAACATGAGATGGCAAAGCTTAAGCTTTCAGGCTCTGCTGATGCCAAACATCAACAAGCTCAGCGTCAGAGGTCCCACTCTATATCGCCTCAGAGGTCCACTGGGAGGAGGCCTGTTGCTGGAACCACCGGTTGGAAAAAGTGTTCGACTTCCATATCGAATGCCTCCCCTCTTCAGAGAGAGAGTCGCTTTGGTGATCCTCCCAATGGTGGCGGCGCTGTCACTGACAGTGCCGGTCGCGACACTCATCCTATTGGACCTTCCGCCGTTAATTTTAGTGATAAGCAGTATCTAAATATTTTGCAGTCATTAGGGCAGTCAGTTCATATACTGGACGTCAACTCTCGTATCATATATTGGAATCGGACTGCTGAAAATTTATATGGCTATTCAGCAGCAGAAGCCCTTGGTCAGGATGGCATTGAGCTTCTGGTAGACCCAAAGGACTATGGTGTAGCTAATGATATAGTACAACGTGTCATGATGGGAGAGAAGTGGACTGGCCAGTTTCTTGTTAAAAATAAGGAGGGAGAGAGGTTTTTGGTCATTGTCACCAATACTCCATTCTATGATGATGGCGGGGCATTGGTTGGGCTTATTTGTGTCTCTAATGATTCTCGTCCTTATAAGGAAACAAGGGTTTCTTTACCAGGTGGAAAATACTTGGAAACAGATTGGAGTTCCAGCCGGCTAAGAAATGCGATCACAGCAAAACTTGGTCTCGACTCAGAGCAGCCACTGCAAGCTGCAATTGCTTCAAAATTTTCAAATTTGGCTTCTAAAGTGAGCAGCAAAGTCAGGTCAAGGATCCCAGATGGTGAGAACAATATGGACCAGGAAGGTGCGAGTGGTGAGAGCCATCACTCTGATTATGCTGTTTCAGATTTTGTTATTTCTGATCATAGGGAGGATGGTAATTCAAGTGGAGCTAGCACTCCAAGAGGGGAAGTGCAGCCATCTCCTTTTGGTATATTTTCTCTTTTTGAAGAAAGATCCCCTGGAAAATCCTCCAGAGACTCCGCTGATGAAAGTGGAGGAAAACCTCCTATTCACAAGATCATAACTTCAAAAGCAGAGGCGCTAATTGGTAAGAAAGTAATATCTTGGCCATGGAAAGGAAATGACCGAGAGGGGCCAGATGCAAGGACTGCTCGTTTTGCTTGGCGTCGGTTTCAGAACAATCAGGAGAATTCTTCTGGACTGAAACCTGAAAGCCAGGCTAGTGAGAGCAACAGGCCTGTCAACAACGAGGCTTCTGGATCTTGGTCCTCAATTAATGCTAACAGCACCAGCAGTGTAAGCAGCTGTGGAAGTGCCGATACTGCTGTTAATAAGGTAGACATGGAAACTGACTGCTTGGATTATGAAATTTTGTGGGAGGATTTGACAATTGGAGAGCAAATTGGACAAGGTTCCTGTGGCACCGTGTATCATGCTCTGTGGTATGGATCAGATGTTGCTGTCAAGGTCTTTTCCAAGCAAGAATACTCTGATGATGTGATACTCTCATTCAGACAAGAGGTAAATTTTTGA 1602 0.4569 MGTPPAEELLKKIQELEEGHATLKHEMAKLKLSGSADAKHQQAQRQRSHSISPQRSTGRRPVAGTTGWKKCSTSISNASPLQRESRFGDPPNGGGAVTDSAGRDTHPIGPSAVNFSDKQYLNILQSLGQSVHILDVNSRIIYWNRTAENLYGYSAAEALGQDGIELLVDPKDYGVANDIVQRVMMGEKWTGQFLVKNKEGERFLVIVTNTPFYDDGGALVGLICVSNDSRPYKETRVSLPGGKYLETDWSSSRLRNAITAKLGLDSEQPLQAAIASKFSNLASKVSSKVRSRIPDGENNMDQEGASGESHHSDYAVSDFVISDHREDGNSSGASTPRGEVQPSPFGIFSLFEERSPGKSSRDSADESGGKPPIHKIITSKAEALIGKKVISWPWKGNDREGPDARTARFAWRRFQNNQENSSGLKPESQASESNRPVNNEASGSWSSINANSTSSVSSCGSADTAVNKVDMETDCLDYEILWEDLTIGEQIGQGSCGTVYHALWYGSDVAVKVFSKQEYSDDVILSFRQEVNF* 534
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte3g00558 533 MobiDBLite consensus disorder prediction 355 369 - -
Pte3g00558 533 MobiDBLite consensus disorder prediction 415 461 - -
Pte3g00558 533 MobiDBLite consensus disorder prediction 37 83 - -
Pte3g00558 533 Pfam PAS fold 119 228 IPR013767 GO:0006355
Pte3g00558 533 Gene3D PAS domain 128 233 - -
Pte3g00558 533 ProSiteProfiles PAC domain profile. 189 241 IPR000700 -
Pte3g00558 533 MobiDBLite consensus disorder prediction 288 311 - -
Pte3g00558 533 ProSiteProfiles PAS repeat profile. 116 187 IPR000014 -
Pte3g00558 533 SUPERFAMILY Protein kinase-like (PK-like) 472 532 IPR011009 -
Pte3g00558 533 SUPERFAMILY PYP-like sensor domain (PAS domain) 120 228 IPR035965 -
Pte3g00558 533 MobiDBLite consensus disorder prediction 324 377 - -
Pte3g00558 533 Coils Coil 6 33 - -
Pte3g00558 533 Gene3D Phosphorylase Kinase; domain 1 478 533 - -
Pte3g00558 533 MobiDBLite consensus disorder prediction 20 111 - -
Pte3g00558 533 SMART pas_2 118 185 IPR000014 -
Pte3g00558 533 CDD PAS 127 228 IPR000014 -
Pte3g00558 533 NCBIfam PAS domain S-box protein 116 224 IPR000014 -
Pte3g00558 533 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 88 531 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte3g00558 Pte-Chr3 4361021 4367126 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte3g00558 1 531 MAP Kinase Kinase Kinase AT3G06620 50.446 9.67e-176 513
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte3g00558 - - qsu:111989009 698.353