Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Pte3g00552 | ATGGCGAAGACATCACAGAAAAACAGCTCAAATGGTAGCAGCAATAATAATCAAAGTTCAACTACCAATACTACTGTCACCAAGGTGAAAAGAACCAGGAGAAGTGTCCCCAGGGACTCTCCTCCTCAACGTAGTTCAATATATCGGGGAGTCACTAGGCACCGGTGGACGGGGAGATATGAAGCTCATTTGTGGGACAAGAATTGCTGGAATGAATCACAAAATAAAAAAGGCAGACAAGGTGCTTATGATGATGAAGAAGCTGCAGCACATGCTTATGATCTAGCTGCATTGAAATACTGGGGTGAAGATACAATTCTCAACTTTCCGGCATCCACTTACGAGAAGGAGATTAAGGAAATGGAAGGTCAATCAAGAGAAGAGTACATTGGATCACTGAGAAGGAGAAGTAGTGGATTCTCGCGAGGAGTTTCCAAATATAGAGGCGTCGCCAGACACCACCATAATGGAAGGTGGGAAGCGAGGATTGGCAGAGTTTTTGGCAACAAGTATCTTTACCTTGGGACTTACGCTACTCAAGAAGAAGCTGCCACGGCATATGATATGGCGGCTATTGAATACCGTGGGCTTAACGCAGTTACTAACTTTGATCTTAGCCGTTATATCAAATGGCTTAAACCTAACAACATTGCAAACAAAGCTAACGATAACAACATTAATCCTACACTGCCTAACCTGAACTACACTGGCATCAATTTAGCTCCAAACCCTGATCAGGAACCAGCTGGTTTGAACTTTTTCCGCAACCAGCCATCTTCAGTAATCAACCGTGGAGAGTCGATGCTGACGACCTCTCAACCAAAGTCAACAACCGCCACATCAGCTCTAGGGCTTCTTCTTCAATCTTCAAAGTTTAAGGAGATGATGGAGATGACAGAGATGACGACATCTATTGTTGCTGATCAGTTTGTATCATCATCTGCAAACCAACCAGCTGACGATCGGTCAGGATTGCCACAGTGCTCATTCCCAAAGGATATACAGACCTACTTTGCTTGTGATAACTCCACCAATTACAGTGAAGGAGATGAATTTGTATTTGGCGATCTCAACTCCTTTAATCCCACAATGTTCCAATGCGACTTTGAAGCATGA | 1116 | 0.4373 | MAKTSQKNSSNGSSNNNQSSTTNTTVTKVKRTRRSVPRDSPPQRSSIYRGVTRHRWTGRYEAHLWDKNCWNESQNKKGRQGAYDDEEAAAHAYDLAALKYWGEDTILNFPASTYEKEIKEMEGQSREEYIGSLRRRSSGFSRGVSKYRGVARHHHNGRWEARIGRVFGNKYLYLGTYATQEEAATAYDMAAIEYRGLNAVTNFDLSRYIKWLKPNNIANKANDNNINPTLPNLNYTGINLAPNPDQEPAGLNFFRNQPSSVINRGESMLTTSQPKSTTATSALGLLLQSSKFKEMMEMTEMTTSIVADQFVSSSANQPADDRSGLPQCSFPKDIQTYFACDNSTNYSEGDEFVFGDLNSFNPTMFQCDFEA* | 372 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Pte3g00552 | 371 | ProSiteProfiles | AP2/ERF domain profile. | 47 | 110 | IPR001471 | GO:0003700|GO:0006355 | |
Pte3g00552 | 371 | FunFam | AP2-like ethylene-responsive transcription factor | 145 | 206 | - | - | |
Pte3g00552 | 371 | MobiDBLite | consensus disorder prediction | 1 | 47 | - | - | |
Pte3g00552 | 371 | Gene3D | AP2/ERF domain | 145 | 206 | IPR036955 | GO:0003700|GO:0006355 | |
Pte3g00552 | 371 | Gene3D | AP2/ERF domain | 47 | 113 | IPR036955 | GO:0003700|GO:0006355 | |
Pte3g00552 | 371 | ProSiteProfiles | AP2/ERF domain profile. | 146 | 204 | IPR001471 | GO:0003700|GO:0006355 | |
Pte3g00552 | 371 | FunFam | AP2-like ethylene-responsive transcription factor | 46 | 112 | - | - | |
Pte3g00552 | 371 | PANTHER | AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR | 11 | 228 | - | - | |
Pte3g00552 | 371 | SUPERFAMILY | DNA-binding domain | 145 | 206 | IPR016177 | GO:0003677 | |
Pte3g00552 | 371 | CDD | AP2 | 145 | 206 | IPR001471 | GO:0003700|GO:0006355 | |
Pte3g00552 | 371 | SMART | rav1_2 | 47 | 116 | IPR001471 | GO:0003700|GO:0006355 | |
Pte3g00552 | 371 | SMART | rav1_2 | 146 | 210 | IPR001471 | GO:0003700|GO:0006355 | |
Pte3g00552 | 371 | SUPERFAMILY | DNA-binding domain | 46 | 112 | IPR016177 | GO:0003677 | |
Pte3g00552 | 371 | Pfam | AP2 domain | 47 | 103 | IPR001471 | GO:0003700|GO:0006355 | |
Pte3g00552 | 371 | Pfam | AP2 domain | 145 | 196 | IPR001471 | GO:0003700|GO:0006355 | |
Pte3g00552 | 371 | PRINTS | Ethylene responsive element binding protein signature | 186 | 206 | IPR001471 | GO:0003700|GO:0006355 | |
Pte3g00552 | 371 | PRINTS | Ethylene responsive element binding protein signature | 48 | 59 | IPR001471 | GO:0003700|GO:0006355 | |
Pte3g00552 | 371 | MobiDBLite | consensus disorder prediction | 1 | 30 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Pte3g00552 | Pte-Chr3 | 4309447 | 4312053 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Pte3g00552 | 43 | 208 | AP2-EREBP Transcription Factor Family | AT5G57390 | 71.006 | 5.92e-85 | 263 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | AP2/ERF-AP2 | Pte3g00552 | AP2 | 2.3e-09 | CL0081 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Pte3g00552 | K09285 | - | qsa:O6P43_022231 | 468.003 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Pte3g00552 | 3 | 4309447 | 4312053 | Pte3g00552 | 3 | 4309447 | 4312053 | RCT |