Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte3g00547 ATGTTTCTTTATCATCGGGGAGTGACTAGAAAGAATGGAATTACGGCCTGTGGACTTTACTCGTTTTTTGTCCTAATTCTTGGTGGAGCGCCTAAGTATGTACAGCATTTGGAAGATGGAAATATGGACGGACATAAACGTCTTGGCTTTAGGTGGGAATGGTATAAGCTTCAAATCGCACATGATGAACCTGCAGACACGAATGGAGACTCATGCTTTGACGGCCGTGAGCGTGTGCGATACACCCGAGACCAGCTGTTACAACTTAAAGAGGTTACTGAAATCCCTGATGATATTCTAAAAATCAAACGGGAAATCGAAACTGAACTTTTTGGTGAGGAGCAAACTTGGAATCGAGCTGAAAACATTCCTCCAAGCCAATTTCAAAACCGTTATTCTGAGTCTGATAATCGTGACTGGCGCGGGCGAACTGCACAAAGTTCAACCCCTGTGGAAGAGAGATCTTGGGAAACTCTCAGAGAGAGCAGAGAGGCAGCTGGTCGATTGGATACAAGGCAACAAGAGAATAATCAACTAAGTTCTCAGTTTGCAAGGGCACATATTTCTTCCAACCATGTGGGAGGGCATGGTCCTGCTCTTGTGAAGGCTGAAGTTCCATGGTCAGCTAGGAGGGCAACTCTTTCTGATAAGGACCGTGTTTTGAAGACTGTTAAGGGGATATTGAATAAGTTGACCCCAGAGAAGTTTGATCTACTTAAAGGTCAATTGATTGACTCAGGCATTACCTCAGCTGATATATTGAAGGATGTCATTTCCTTGATATTTGACAAAGCTGTGCTGGAACCTACATTTTGTCCCATGTATGCACAATTATGTTCTGACCTTAATGAGAAGCTTCCTCCTTTTCCATCGGACGAACCTGGTGGGAAAGAAATTACTTTCAAGCGAATCCTCTTAAATAACTGCCAAGAGGCTTTTGAAGGTGCTGATCAAATGAGAGAAGAATTGAGGCAGATGACTGCTCCTGAGCAGGAGATGGAGCGGAGAGATAAAGAAAGGCTTGTAAAGCTCCGCACTCTTGGAAACATCCGTTTAATTGGTGAGCTGTTGAAGCAAAAGATGGTGCCGGAAAAGATTGTCCATCACATTGTGCAGGAACTTTTAGGTCAACCAGATAGCAATACCTGTCCTGCTGAAGAAAATGTTGAAGCCATATGTCAGTTCTTCAACACCATTGGTAAGCAGCTTGATAAGAGCCCAAAGTCTCGTCACATAAATGATATGTACTTTAGCCGACTGAAGGAATTAAGTACACACTCCCAGCTTGCCCAACGTTTGAGGTTTATGCTTCGGGATGTTTTAGATTTGCGATCAAACAACTGGGTTCCCAGACGTGAAGAGGTGAAAGCTAAAACTATAAATGAAATTCATTCAGAGGCAGAAAAGAACCTGGGTTTGCGACCTGGAGCCACTGCTAGCATAAGAAATAATCGTGGGCCTGGTGGACAAGGTAACACTGGGCCAGGTGGATTCCCCATTGCTAGGCCTGGGGCTGGTGGTTTGATGCCTGGTATGCCTGGGACCAGGAAGATGCCTGGGGTGCCTGGCATGGATAATGACAACTGGGAAATGCCAAGAACTAGATCCACGATAAGGGGTGATAATCATGCGCTCCAGTCTGCAGGACGTGGTCAGTCACCTCTAATGAGTCGGATACCGTCACTGAATTCGAAGCTCTTACCTCAAGGTAGTGCTGGTTTTGTTAGTGGAAGGAGTAGTGCTCTGTTGCAAGGGAGTGCCTTACCTTCTGGTCGTCCGAATTTGGATGGCTATGGTAATGAAGCTTCACCAGAAATTTCTGTACCTGCCAAGCCTACTGTTACGCCAGCATCCATTTCTCCTCCTCCTGAAAATTTGCAGGTTCCATCTCCAAGGTTGAAACCTGACGATCTTCGCAGGAAAACTATCTCTCTACTGGAAGAATACTTCAGCATTCGGTTGTTAGATGAGGCATTGCAATGCGTGCAGGAGCTTAATTCTCCGAACTACAATCCAGAGGTTGTGAAGGAAGCTATTTCTATTGCACTTGAAAAAAGTCCACCATGTGTTGAACCTGTGGCTAGTCTTCTGGAATATCTTTTCATAAAGAAGATTCTTACAGCTACAGACGTAGGAACTGGATGTCTACTTTATGGTTCAATGTTAGATGACATTGCCATTGATTTACCTAAAGCGCCTAATAATTTTGGTGAGATTATCGGGAGATTAATACTGGCCGGGGGAATGGATTTCAATGTGGTGAAGGAGATCCTTGAAAAACTAGAAGATGACAGAACCCAGAAAGCAATATTTGATGCAGCAGTCAGGATAATCAGTGCTGAATCAGGACAGGGTATCTTGGACTCTCACGCATCTGACATTGAAGCCTGTCGAAGCCTGCTTGGGTAA 2409 0.4462 MFLYHRGVTRKNGITACGLYSFFVLILGGAPKYVQHLEDGNMDGHKRLGFRWEWYKLQIAHDEPADTNGDSCFDGRERVRYTRDQLLQLKEVTEIPDDILKIKREIETELFGEEQTWNRAENIPPSQFQNRYSESDNRDWRGRTAQSSTPVEERSWETLRESREAAGRLDTRQQENNQLSSQFARAHISSNHVGGHGPALVKAEVPWSARRATLSDKDRVLKTVKGILNKLTPEKFDLLKGQLIDSGITSADILKDVISLIFDKAVLEPTFCPMYAQLCSDLNEKLPPFPSDEPGGKEITFKRILLNNCQEAFEGADQMREELRQMTAPEQEMERRDKERLVKLRTLGNIRLIGELLKQKMVPEKIVHHIVQELLGQPDSNTCPAEENVEAICQFFNTIGKQLDKSPKSRHINDMYFSRLKELSTHSQLAQRLRFMLRDVLDLRSNNWVPRREEVKAKTINEIHSEAEKNLGLRPGATASIRNNRGPGGQGNTGPGGFPIARPGAGGLMPGMPGTRKMPGVPGMDNDNWEMPRTRSTIRGDNHALQSAGRGQSPLMSRIPSLNSKLLPQGSAGFVSGRSSALLQGSALPSGRPNLDGYGNEASPEISVPAKPTVTPASISPPPENLQVPSPRLKPDDLRRKTISLLEEYFSIRLLDEALQCVQELNSPNYNPEVVKEAISIALEKSPPCVEPVASLLEYLFIKKILTATDVGTGCLLYGSMLDDIAIDLPKAPNNFGEIIGRLILAGGMDFNVVKEILEKLEDDRTQKAIFDAAVRIISAESGQGILDSHASDIEACRSLLG* 803
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte3g00547 802 Gene3D - 630 793 - -
Pte3g00547 802 Coils Coil 306 326 - -
Pte3g00547 802 MobiDBLite consensus disorder prediction 474 497 - -
Pte3g00547 802 MobiDBLite consensus disorder prediction 117 157 - -
Pte3g00547 802 Pfam MA3 domain 638 749 IPR003891 -
Pte3g00547 802 SUPERFAMILY ARM repeat 214 450 IPR016024 -
Pte3g00547 802 SUPERFAMILY ARM repeat 631 790 IPR016024 -
Pte3g00547 802 SMART if4_15 221 447 IPR003890 GO:0003723|GO:0005515
Pte3g00547 802 SMART ma3_7 638 750 IPR003891 -
Pte3g00547 802 Gene3D - 212 448 - -
Pte3g00547 802 MobiDBLite consensus disorder prediction 119 133 - -
Pte3g00547 802 FunFam Eukaryotic translation initiation factor isoform 4G-2 212 448 - -
Pte3g00547 802 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4 GAMMA 65 786 IPR045208 GO:0003743
Pte3g00547 802 Pfam MIF4G domain 221 447 IPR003890 GO:0003723|GO:0005515
Pte3g00547 802 ProSiteProfiles MI domain profile. 637 759 IPR003891 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte3g00547 Pte-Chr3 4264131 4270303 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte3g00547 69 800 Eukaryotic Initiation Factors Gene Family AT5G57870 64.005 0.0 922
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte3g00547 K03260 - qsa:O6P43_022212 1100.12
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte3g00547 3 4264131 4270303 Pte3g00547 3 4264131 4270303 RCT