Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte3g00544 ATGGCAAAAGCAAATATCATGGGAGCACAAAGAAAAGACGACACTCTTGTACTCTTGTCCCTCTTATTCCTGTGGTCTTTTTCATTCATGGCCACCGTGTTAGCGGATGATGTGCCCAAGCAACAACAGCAAGATAAAATCTACAAGCTTCCGGGACAACCTTCTGTGACATTTTCACAGTTTTCTGGGTATGTGACAGTCAGTGAAGAACATGGACGAGCTCTCTTTTACTGGTTGACAGAGTCAACCTCTTCTCCAAACAAGAAACCTCTGGTCCTCTGGCTCAATGGGGGACCTGGTTGCTCATCTGTAGCATATGGTGCGTCTGAGGAAATAGGCCCCTTCAGGATAAACAAAACCGGTTCTTCTCTCTATATTAATAAATATTCTTGGAATAAAGAGGTAAATATTCTCTTTCTCGAATCCCCGGCTGGTGTCGGTTTCTCATACACAAACACGAGCTCTAACCTCAAAGATTCTGGAGATAAGAGGACAGCTCAGGATGCTCTAGTTTTTCTTGTTAGATGGATGTCTAGATTTCCACAATATAAATATAGAGAATTCTACATTTCTGGGGAGAGCTATGCAGGTCATTATGTCCCCCAGTTGGCCAAGAAAATTCATGATTATAACAAAGGGAATCACCGTCCTATCATTAATTTGAAAGGATTCATTGTGGGGAATGCTGTTACAGATAATTATTATGATGGTATAGGAACTGTGACTTACTGGTGGAGTCACTCCATGATATCTGACAGTACATACAGATCAATCATCAAATATTGCAATTTCTCTTCCAGTAAAACATCCAAGAAATGTGATGCTGCAATTGATCATGCAGTTTACCATGAATTTGGAAAAATTGATCAGTACAGTATTTATACACCATTCTGCAAATCAACCAGCAACAACACTAACCGCTACATTCGCCTGAAAGGTTCCCTCTTACATAGAAGGATTTCTGGGTATGATCCTTGTACAGAAAACTATGCAGAGATATATTACAATCGCCCTGACGTGCAACATGCCATGCATGCTAATACCACCAAGATTCCTTACAATTGGACTGCTTGCAGTGATATTCTCATAAAGAACTGGAAGGATTCTGAAGTTTCTATGTTGCCAATATACAAGGAGCTAATTGCAGCTGGCTTAAGAATATGGGTTTTCAGTGGGGACACAGATTCTGTTGTTCCTGTGACGGCAACTAGGTTTTCACTCAACCATCTCAACCTAACCATTAAAACTAGATGGTATCCGTGGTATTCCGGTGACCAGGTAGGAGGATGGACAGAGGTGTACGATGGCCTCACATTTGCAACAGTGAGAGGGGCTGGTCATGAAGTACCATTGCTGCAACCAAAGCGAGCTTACATTCTTTTCAGATCGTTCTTGGCAGGGAAAGAGTTGCCGAAAGCTTGA 1422 0.4177 MAKANIMGAQRKDDTLVLLSLLFLWSFSFMATVLADDVPKQQQQDKIYKLPGQPSVTFSQFSGYVTVSEEHGRALFYWLTESTSSPNKKPLVLWLNGGPGCSSVAYGASEEIGPFRINKTGSSLYINKYSWNKEVNILFLESPAGVGFSYTNTSSNLKDSGDKRTAQDALVFLVRWMSRFPQYKYREFYISGESYAGHYVPQLAKKIHDYNKGNHRPIINLKGFIVGNAVTDNYYDGIGTVTYWWSHSMISDSTYRSIIKYCNFSSSKTSKKCDAAIDHAVYHEFGKIDQYSIYTPFCKSTSNNTNRYIRLKGSLLHRRISGYDPCTENYAEIYYNRPDVQHAMHANTTKIPYNWTACSDILIKNWKDSEVSMLPIYKELIAAGLRIWVFSGDTDSVVPVTATRFSLNHLNLTIKTRWYPWYSGDQVGGWTEVYDGLTFATVRGAGHEVPLLQPKRAYILFRSFLAGKELPKA* 474
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte3g00544 473 FunFam Carboxypeptidase 373 467 - -
Pte3g00544 473 ProSitePatterns Serine carboxypeptidases, histidine active site. 437 454 IPR033124 GO:0004185
Pte3g00544 473 SUPERFAMILY alpha/beta-Hydrolases 43 470 IPR029058 -
Pte3g00544 473 FunFam Carboxypeptidase 41 300 - -
Pte3g00544 473 Gene3D - 373 467 - -
Pte3g00544 473 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 45 454 IPR001563 GO:0004185|GO:0006508
Pte3g00544 473 ProSitePatterns Serine carboxypeptidases, serine active site. 190 197 IPR018202 GO:0004185
Pte3g00544 473 Gene3D - 326 362 - -
Pte3g00544 473 Pfam Serine carboxypeptidase 52 466 IPR001563 GO:0004185|GO:0006508
Pte3g00544 473 Gene3D alpha/beta hydrolase 41 300 IPR029058 -
Pte3g00544 473 FunFam Carboxypeptidase 322 470 - -
Pte3g00544 473 PRINTS Carboxypeptidase C serine protease (S10) family signature 127 139 IPR001563 GO:0004185|GO:0006508
Pte3g00544 473 PRINTS Carboxypeptidase C serine protease (S10) family signature 140 150 IPR001563 GO:0004185|GO:0006508
Pte3g00544 473 PRINTS Carboxypeptidase C serine protease (S10) family signature 176 201 IPR001563 GO:0004185|GO:0006508
Pte3g00544 473 PRINTS Carboxypeptidase C serine protease (S10) family signature 437 450 IPR001563 GO:0004185|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte3g00544 Pte-Chr3 4245669 4250171 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte3g00544 331 470 Calmodulin-binding Proteins AT2G22960 29.078 1.04e-13 67.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte3g00544 K16297 - tcc:18587826 777.319
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte3g00544 3 4245669 4250171 Pte3g00544 3 4245669 4250171 RCT