Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte3g00536 ATGGCTGACAAAGGCGTAGATAGTCAGTCGTCGTTGCTTTATGGAAAGTACGAGCTTGGTCGCGTACTTGGTCATGGTACCTTTGCCAAGGTGTACCTTTCTAGGAACCTGAAGACTGGCAAGAGCGTCGCCATGAAGGTAGTTGGTAAAGACAAAGTGATTAAAGTGGGCATGATGGAACAAATCAAAAGAGAAATTTCGGTCATGAAGATGGTCAAGCACCCAAACATTGTGGACCTGCAGGAAGTCATGGCTAGCAAATCTAAGATCTATTTCGTGATGGAGCTCGTTCGAGGTGGTGAGCTCTTTGCAAAGGTTGCTAAAGGTCGTTTGAGAGAAGACGTTGCCAGAGTTTACTTCCAGCAATTGATATCGGCCATTGATTTTTGCCACAGCCGTGGTGTTTACCACCGTGATCTCAAACCGGAGAATCTCTTGTTAGATGAAGATGGCAACTTGAAAGTTACTGACTTTGGTCTCAGTGCCTTCACGGAGCACCTCAGGCAGGATGGATTGCTGCACACCACGTGTGGAACTCCAGCCTACGTAGCACCAGAGGTGATTGGGAAGAAAGGTTACGATGGTGCCAAGGCTGATATTTGGTCATGTGGGGTCATCCTCTATGTGCTTCTGGCTGGCTGCCTACCATTTCAAGACGACAACTTGGTAGCCATGTACAGGAAAATTTACAGGGGTGACTTCAAATGCCCACCGTGGTTTTCATCCGATGCTCGCCGGCTTATTACCAAACTTCTCGATCCAAACCCGAATACCAGAATTACGATTCCCAAGATCATGGAGTCATCTTGGTTTAAGAAATCAGTCCCAAAACATATAAAGACCAAAGAGGAACAAGAATTTGAATCACTGGATGGTGAAGGGTGTGAAAACTCAAAGCAGCAACAGGGGGAGCCTGAGACTATGAATGCGTTTCACATAATATCTTTGTCGCAGGGGTTCGATTTGTCTCCTTTATTCGAAGAGAAGAGGAAGGAAGAGAAGGAGGAGTTGAGGTTTGCAACCACAAGACCTGCGAGCAGTGTGATATCAAAATTGGAGGAGGTGGCCAAGTCTGGAAAGTTCCATGTAAACAAGAGTGATACCAAGGTGAGAATGCAGGGACAAGAGTGTGGAAGGAAAGGGAAGCTTGCAATTGCGGCAGACATATATGCTGTGACGCCGTCTTTTCTGGTGGTAGAGGTAAAGAAGGATCACGGTGATACCTTGGAGTATAAACAGTTCTGCAGCAAAGAGCTCCGGCCTGCACTCAAGGATATTGTGTGGACATCGGCCACAGAGAAATCAACGCCTGCTTGA 1317 0.4677 MADKGVDSQSSLLYGKYELGRVLGHGTFAKVYLSRNLKTGKSVAMKVVGKDKVIKVGMMEQIKREISVMKMVKHPNIVDLQEVMASKSKIYFVMELVRGGELFAKVAKGRLREDVARVYFQQLISAIDFCHSRGVYHRDLKPENLLLDEDGNLKVTDFGLSAFTEHLRQDGLLHTTCGTPAYVAPEVIGKKGYDGAKADIWSCGVILYVLLAGCLPFQDDNLVAMYRKIYRGDFKCPPWFSSDARRLITKLLDPNPNTRITIPKIMESSWFKKSVPKHIKTKEEQEFESLDGEGCENSKQQQGEPETMNAFHIISLSQGFDLSPLFEEKRKEEKEELRFATTRPASSVISKLEEVAKSGKFHVNKSDTKVRMQGQECGRKGKLAIAADIYAVTPSFLVVEVKKDHGDTLEYKQFCSKELRPALKDIVWTSATEKSTPA* 439
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte3g00536 438 ProSiteProfiles Protein kinase domain profile. 17 271 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte3g00536 438 ProSitePatterns Protein kinases ATP-binding region signature. 23 50 IPR017441 GO:0005524
Pte3g00536 438 ProSiteProfiles NAF domain profile. 303 327 IPR018451 GO:0007165
Pte3g00536 438 FunFam Non-specific serine/threonine protein kinase 8 96 - -
Pte3g00536 438 CDD STKc_SnRK3 16 270 - -
Pte3g00536 438 Gene3D Kinase associated domain 1, KA1 302 429 - -
Pte3g00536 438 FunFam Non-specific serine/threonine protein kinase 7 297 - -
Pte3g00536 438 PANTHER CALCIUM/CALMODULIN-DEPENDENT PROTEIN KINASE KINASE-RELATED 9 425 - -
Pte3g00536 438 Pfam Protein kinase domain 17 271 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte3g00536 438 Gene3D Transferase(Phosphotransferase) domain 1 97 277 - -
Pte3g00536 438 SMART serkin_6 17 271 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte3g00536 438 ProSitePatterns Serine/Threonine protein kinases active-site signature. 135 147 IPR008271 GO:0004672|GO:0006468
Pte3g00536 438 Pfam NAF domain 305 365 IPR004041 GO:0007165
Pte3g00536 438 Gene3D Phosphorylase Kinase; domain 1 7 96 - -
Pte3g00536 438 FunFam Non-specific serine/threonine protein kinase 303 428 - -
Pte3g00536 438 CDD CIPK_C 309 424 - -
Pte3g00536 438 SUPERFAMILY Protein kinase-like (PK-like) 13 288 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte3g00536 Pte-Chr3 4169964 4172121 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte3g00536 8 439 CBL-interacting serine-threonine protein kinases AT4G30960 76.364 0.0 647
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Pte3g00536 Pkinase 2.1e-74 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte3g00536 - K07198 qsa:O6P43_002997 749.199