Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte3g00514 ATGGGAGCGAGGAGTAGTCGACTGGGGTCACGACCTTCTCGTATCCGAGATAACACCACAAACAACTTCAATCTATATTCTCTCCTCTGTGGTGGCTCCTCTTCTCGCGCTATGGATGAGATGGACGACCAACCAGTTGAACCTCAGGCATATTCCTCTGAAAGTTTAATTCCTGCCATTATGGGAGTTTGCAGAGGCAGGGAGGAGTCATCCGCAGCAAGTTGTGTGGATACTAGGGGTAGTATCTCACCTGCTGAAAATGGCACCTCATCTATGAACAATTTAGAATTTTGCAACAGTGCTGTTGTTGAAGAAAGGGCTGGGTGCATTGCCACTGTTACTGAGAGGAAGAACTTGTCTGAAAGTAAGGAGCTAATTCCTCCTCATCAGGTAAGCTCTAGTCATAGTAATGATGAATCTTCTAGGGATAGTAGAGCACTAGTTAGTTCTTCATTTGTAGGACAACATTCTTCAGATCCAGTCTCTATGAATATCTCGGCTAATGAGGCTGTAGTCAATGGCGTTGGCAATTCAGTGGATAAGGGTGTATCTCAAACCATTTCCAAGGCCATCCATCCAAGGAACTCACCTCTTCAAGGGTCTGGCGATTCCAGTTCTGCTACAAGCTCTGCTGAGAACCATGTGGGTGAAGTTTTAGAAGTCCAGATTTTGGAGTCTGATTCTGCTAGCCAAGCTTCTGATTTTCACGTAACTTCTCATATCCTTGGACATGAATCTTTTGAAGAGCCACCAACTTCAGGTCTAGGATTTGTCATGTCTAATAGAGAAATAGGGCAAAGAGATGGAAGCTTACTACATGTTGATGCGGTTACGATTTCTACCAACATTTTGCCTATCAGTGATATTGATTCTAGTAACAACGAGTCAAGAAGGAGAGGTAGAAGATTATTTTGGGATACGTTCTCGCTACATAATTCTAGAAGACATGGTGATTCTTCACACAGTCTGTTCTCTGCCAGTGATGGTGATGAACACAGTTCTCATGACAGATGGCTCCTGGATTTGACTGGTGATTTATTTAGTGATGGAGTTGGAGATGACTCTAGACGCATGGGTAGTAGAATTCACAGATTGAATGAACAAAGAAGGCATTCAAGATCTGAGATCTGGGAAAGGCTTCGAGGTGGCCTTGACGAGATTAATCGTTGGAATAACTCTTGTCCACTAGGACTCCATCCTGACGGTGATTGTGCTTGTGAGGTGAATCCAGTCACTGACGAATCTAGTACTCGTGCAAACATCTCAAGAATAGTCATGCTTGCTGAAGCTTTATTTGAGGTCCTAGATGAAATTCATCGTCAGCCAGTGTCACTTTCCCTTTCCATGGTCTCAATCCCAGCTCCAGAATCAATCGTGGATTCCTTCCCCCTCAAGCATCACAAAAAAGTTGAATCAAGTGAGGGTGGCATTGATGTTGAACAATGTTACATTTGTCTGGCAGATTATGAAGAAGGTGATAAAATACGAGTGCTTCCATGCCAGCACGAGTATCACATGGCTTGTGTTGACAAGTGGCTGAAAGAGATCCATGGGTATTTTTACATTACACCACCAATCTATCCTTAA 1587 0.4354 MGARSSRLGSRPSRIRDNTTNNFNLYSLLCGGSSSRAMDEMDDQPVEPQAYSSESLIPAIMGVCRGREESSAASCVDTRGSISPAENGTSSMNNLEFCNSAVVEERAGCIATVTERKNLSESKELIPPHQVSSSHSNDESSRDSRALVSSSFVGQHSSDPVSMNISANEAVVNGVGNSVDKGVSQTISKAIHPRNSPLQGSGDSSSATSSAENHVGEVLEVQILESDSASQASDFHVTSHILGHESFEEPPTSGLGFVMSNREIGQRDGSLLHVDAVTISTNILPISDIDSSNNESRRRGRRLFWDTFSLHNSRRHGDSSHSLFSASDGDEHSSHDRWLLDLTGDLFSDGVGDDSRRMGSRIHRLNEQRRHSRSEIWERLRGGLDEINRWNNSCPLGLHPDGDCACEVNPVTDESSTRANISRIVMLAEALFEVLDEIHRQPVSLSLSMVSIPAPESIVDSFPLKHHKKVESSEGGIDVEQCYICLADYEEGDKIRVLPCQHEYHMACVDKWLKEIHGYFYITPPIYP* 529
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte3g00514 528 PANTHER RING ZINC FINGER DOMAIN SUPERFAMILY PROTEIN-RELATED 1 518 - -
Pte3g00514 528 MobiDBLite consensus disorder prediction 143 160 - -
Pte3g00514 528 MobiDBLite consensus disorder prediction 121 160 - -
Pte3g00514 528 Pfam RING-like zinc finger 481 509 IPR001841 -
Pte3g00514 528 SUPERFAMILY RING/U-box 481 514 - -
Pte3g00514 528 ProSiteProfiles Zinc finger RING-type profile. 482 512 IPR001841 -
Pte3g00514 528 MobiDBLite consensus disorder prediction 191 212 - -
Pte3g00514 528 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 447 519 IPR013083 -
Pte3g00514 528 FunFam Putative RING zinc finger domain superfamily protein 449 522 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte3g00514 Pte-Chr3 4054512 4058362 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte3g00514 391 517 C3H Transcription Factor Family AT5G45290 52.482 4.82e-36 139
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte3g00514 - - qsa:O6P43_023995 590.882
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte3g00514 3 4054512 4058362 Pte3g00514 3 4054512 4058362 RCT