Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte3g00512 ATGTGTGTTCAGGAAGCAGAGCAAATTGGTCTCAATATGGGTAGTTCGGATAACGGGAGACAGTCATGGCCTTCTCATTGTGACTATTTGCATGCTCACTTCAAAAACTGGGATAATGGCTCTTCTTTCATTGGCACTGGTGACCGGAACACTGCTGGGAATTCACTTCCTCTGGAAAGTGTATGTGAAGATAAAGTGCTTTTGGATGGAAAACAGAACCCACTGAACTTGTTCCCTGATCTCCGGTCTGGAGATTGGTCAGATATTGGTGGTCGTTCCTATATGGAGGATACTCACATTTGCATTAAAGACTTGGCTAAGAAGTTTGGTTGCGATGTACTTACTCGTGAAGCTATATCCTTCTACGGTGTATTTGATGGCCACGGAGGTAAGAGTGCTGCAGAATTTGTGCGTGACAATCTTCCACGAGTTATTGTTGAGGATGTAGATTTTCCCTTGGAGCTTGAGAAAGTAGTCACAAGGTCATTTAAAGAGACTGATACTGCATTTGCACAAAGGTGCTCTCTCGAGTCTTCACTTTCTTCTGGTACAACTGCATTAACAGCAATGATATTTGGGAGGTCTTTACTGGTGGCGAATGCCGGGGATTGCCGTGCTGTTTTATCTCGACATGGGGTGGCTATAGAAATGTCCAAAGATCATAGGCCCTGTTGCACCAAGGAAAGGATGCGAATTGAGTCCTTAGGTGGATTTATTGATGATGATTATCTTAATGGTCAATTAGCTGTGACCCGTGCCTTAGGTGATTGGCATCTTGAGGGAATGAAAGAAATTGGCGAAAGAGGTGGACCACTGAGTGGTGAACCTGAACTTAAGTTGATTACATTGACCAGAGAAGATGAGTTTCTAATAATTGGAAGTGATGGTATCTGGGACGTCTTCAGTAGCCAAAATGCTGTTGATTTTGCACGGAGGAGACTTAAGCAACATAATGATGTCAAATTGTGCTGCAAACAAGTTGTGGAAGAGGCAATCAAACGAGGTTCTACTGATAATTTGACAGTAGTGATGGTATGTTTTCATTCTGAACCTCCGCTACTGCCGATAGTGGAAAAGACAAGAGTAAGAAGAAGCATTTCTGCTGAGGGATTGCAGAATCTTAGGTACCTGCTACAAGGATAG 1143 0.4322 MCVQEAEQIGLNMGSSDNGRQSWPSHCDYLHAHFKNWDNGSSFIGTGDRNTAGNSLPLESVCEDKVLLDGKQNPLNLFPDLRSGDWSDIGGRSYMEDTHICIKDLAKKFGCDVLTREAISFYGVFDGHGGKSAAEFVRDNLPRVIVEDVDFPLELEKVVTRSFKETDTAFAQRCSLESSLSSGTTALTAMIFGRSLLVANAGDCRAVLSRHGVAIEMSKDHRPCCTKERMRIESLGGFIDDDYLNGQLAVTRALGDWHLEGMKEIGERGGPLSGEPELKLITLTREDEFLIIGSDGIWDVFSSQNAVDFARRRLKQHNDVKLCCKQVVEEAIKRGSTDNLTVVMVCFHSEPPLLPIVEKTRVRRSISAEGLQNLRYLLQG* 381
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte3g00512 380 CDD PP2Cc 82 347 IPR001932 -
Pte3g00512 380 ProSiteProfiles PPM-type phosphatase domain profile. 82 347 IPR001932 -
Pte3g00512 380 PANTHER PROTEIN PHOSPHATASE 2C 70 345 IPR015655 GO:0004722|GO:0006470
Pte3g00512 380 SMART PP2C_4 72 345 IPR001932 -
Pte3g00512 380 ProSitePatterns PPM-type phosphatase domain signature. 121 129 IPR000222 GO:0043169
Pte3g00512 380 Pfam Protein phosphatase 2C 92 339 IPR001932 -
Pte3g00512 380 SUPERFAMILY PP2C-like 77 349 IPR036457 -
Pte3g00512 380 Gene3D - 71 351 IPR036457 -
Pte3g00512 380 FunFam Probable protein phosphatase 2C 22 68 350 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte3g00512 Pte-Chr3 4048151 4051053 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte3g00512 71 380 PP2C-type Phosphatase Gene Family AT2G25620 59.236 6.51e-129 374
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF DBP Pte3g00512 PP2C 2.9e-67 CL0238
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte3g00512 K14803 - rcu:8275709 568.926
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte3g00512 3 4048151 4051053 Pte3g00512 3 4048151 4051053 RCT