Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte3g00499 ATGTCATCGGAGATCGAGGTCATCGAAGAGGTTCCGTCTCGGCATCAGCAATTGCAGGCATCTGATGCTTCAGTCGGCGGTACAGATGGGGTTGATGAGGAGAGTCTGAGGAATGATGTGTACACTGCTGCGGCGTATGGCGATATGGAGAAGTTACAGAGATTGGTAGGGCAAGAAGGTTGCTCGGTCTGCGAACAGGATGGGTCGGGATATTACGCGCTTCAATGGGCTGCATTGAACAACCGTACTGCTGCTGCTCAATTCATCATTGAGCACGGAGCAGACATTAATGCAACGGATCACTCGGGGCAGACGGCATTACATTGGAGCGCTGTTCGGGGTGCAATTCAGGTAGCTGAGCTATTACTCCAAGAGGGTGCCCGTCTTGGCGCTCCTGATATGTATGGCTATCAGATAACACATGTTGCAGCTCAATATGGTCAGACTGCCTTCCTTTATCACATTGTTTCGAAGTGGAATGCTGACCTTGATGTTCCTGATAATGATGGAAGAAGCCCCCTACACTGGGCTGCTTACAAAGGTTATGCAGATTGTATACGTCTTCTATTATTTCTTGATGCATATAGGGGCCGCCAGGATAAGGAGGGTTGTACGCCACTTCATTGGGCAGCTATAAGGGGTAACTTGGAGGCCAGTACCATATTAGTGCAGGCTAGTAAGAAGGAAGATCTCATAGTTACTGATAATACAGGCCTTACACCGGCACAACTTGCTGCAGATAAGAATCACAGACAAGTTGCCTTTTTCCTTGGAAATGCCAGATTGTTGCTTGACAAACAGCGTGATGGGAACAGTCATTTGGGAAAGCTATCCAAATTAGGATTTGCTCCTGCTCTTTGGTGTGTAATCTTTCTGCTTTTGGTGATTTACACCCACTCTGTAATTCTAGCATCAAAAATGCCAAAGTTAGCGGCTACTTCTGGCCTTATTGCTTGGTTTGGAGTTTTTCTGGCATTGGCTGGATTAGTACTGCTTTACCAATGTAGTAGTAAAGATCCTGGCTACATCAGAATGAATATACATGATTCTCCCAATATGAAAGATGATGAACCACTTCTAAAGATTGAGATAAACAATCCAGCTTTGCTAGCTGGAAATTGGTCTCAGCTTTGTGCAACATGCAAGATTGTCCGGCCTCTTCGTGCAAAACACTGCTCCATCTGTAATCATTGTGTCGAGCAGTTTGATCATCACTGTCCCTGGGTATCGAATTGTATAGGAAAGAAAAATAAATGGGAGTTCTTCATGTTTCTTCTGCTCGAAGTATTGGCAATGATTGTCACAGGTGGAATTGCTATGACAAGACTTCTCACTGATCCATTAGCTCCATCCGGGTTTGGACCATGGCTTAAATATGCTGGTCATCATCATGCTGGTGCTATAATGTTTATAACAGCAGAATTCTTCCTCTTCTTTGGAGTCGCAGTTTTATTTGTTGTTCAAGCTTCACAGATATCACGGAATATCACAACCAACGAAATGGCAAATGCTATGCGTTATAGCTACCTTCGGGGGGCAGGTGGCCAGTTCAGGAATCCTTATGATCATGGCATCAAGAAGAACTGCTCAGATTTCTTGTTAAAGGGGTACAACGAAGATGCTGAGTCTATTGAAGAATCGGATCCTTCGGAGGGGACGGTTATGATGCATGTGCAAAGAAACTCAAACTTAGCAAATGGAAATGTTTCCTGTCATTGTGGAGACGGCAATGGCCACCATGTTATAGACGTTAGCTCTAGTGGTGTGCCCAGTAAAATTCATCACAGTCATGGCAGTGGTCACGCCCACTCCTCCCACTGTAGTCATAGCAACCATAGTAAAATCCAAAACGATAATGTGCCTTTAGGCTTGGACCTTGGACTTGGTCGTAGCACAAGCACATCTGTTGCGACCCTGCGATGA 1923 0.4519 MSSEIEVIEEVPSRHQQLQASDASVGGTDGVDEESLRNDVYTAAAYGDMEKLQRLVGQEGCSVCEQDGSGYYALQWAALNNRTAAAQFIIEHGADINATDHSGQTALHWSAVRGAIQVAELLLQEGARLGAPDMYGYQITHVAAQYGQTAFLYHIVSKWNADLDVPDNDGRSPLHWAAYKGYADCIRLLLFLDAYRGRQDKEGCTPLHWAAIRGNLEASTILVQASKKEDLIVTDNTGLTPAQLAADKNHRQVAFFLGNARLLLDKQRDGNSHLGKLSKLGFAPALWCVIFLLLVIYTHSVILASKMPKLAATSGLIAWFGVFLALAGLVLLYQCSSKDPGYIRMNIHDSPNMKDDEPLLKIEINNPALLAGNWSQLCATCKIVRPLRAKHCSICNHCVEQFDHHCPWVSNCIGKKNKWEFFMFLLLEVLAMIVTGGIAMTRLLTDPLAPSGFGPWLKYAGHHHAGAIMFITAEFFLFFGVAVLFVVQASQISRNITTNEMANAMRYSYLRGAGGQFRNPYDHGIKKNCSDFLLKGYNEDAESIEESDPSEGTVMMHVQRNSNLANGNVSCHCGDGNGHHVIDVSSSGVPSKIHHSHGSGHAHSSHCSHSNHSKIQNDNVPLGLDLGLGRSTSTSVATLR* 641
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte3g00499 640 SUPERFAMILY Ankyrin repeat 39 258 IPR036770 -
Pte3g00499 640 Gene3D - 157 261 IPR036770 -
Pte3g00499 640 ProSiteProfiles DHHC domain profile. 376 426 - -
Pte3g00499 640 ProSiteProfiles Ankyrin repeat profile. 169 201 IPR002110 GO:0005515
Pte3g00499 640 Gene3D - 28 156 IPR036770 -
Pte3g00499 640 ProSiteProfiles Ankyrin repeat region circular profile. 202 224 - -
Pte3g00499 640 ProSiteProfiles Ankyrin repeat profile. 202 224 IPR002110 GO:0005515
Pte3g00499 640 MobiDBLite consensus disorder prediction 587 618 - -
Pte3g00499 640 ProSiteProfiles Ankyrin repeat region circular profile. 69 100 - -
Pte3g00499 640 PANTHER ANK_REP_REGION DOMAIN-CONTAINING PROTEIN-RELATED 32 542 - -
Pte3g00499 640 ProSiteProfiles Ankyrin repeat profile. 69 101 IPR002110 GO:0005515
Pte3g00499 640 FunFam S-acyltransferase 27 155 - -
Pte3g00499 640 ProSiteProfiles Ankyrin repeat profile. 102 134 IPR002110 GO:0005515
Pte3g00499 640 Pfam Ankyrin repeats (3 copies) 133 190 IPR002110 GO:0005515
Pte3g00499 640 Pfam Ankyrin repeats (3 copies) 43 131 IPR002110 GO:0005515
Pte3g00499 640 Pfam Ankyrin repeats (3 copies) 200 257 IPR002110 GO:0005515
Pte3g00499 640 MobiDBLite consensus disorder prediction 1 33 - -
Pte3g00499 640 ProSiteProfiles Ankyrin repeat region circular profile. 102 133 - -
Pte3g00499 640 ProSiteProfiles Ankyrin repeat region circular profile. 169 190 - -
Pte3g00499 640 MobiDBLite consensus disorder prediction 603 618 - -
Pte3g00499 640 Pfam DHHC palmitoyltransferase 376 503 IPR001594 GO:0016409
Pte3g00499 640 SMART ANK_2a 202 231 IPR002110 GO:0005515
Pte3g00499 640 SMART ANK_2a 169 201 IPR002110 GO:0005515
Pte3g00499 640 SMART ANK_2a 237 266 IPR002110 GO:0005515
Pte3g00499 640 SMART ANK_2a 135 165 IPR002110 GO:0005515
Pte3g00499 640 SMART ANK_2a 102 131 IPR002110 GO:0005515
Pte3g00499 640 SMART ANK_2a 69 98 IPR002110 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte3g00499 Pte-Chr3 3958397 3965524 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte3g00499 43 222 Ion Channels AT2G25600 33.149 1.20e-12 69.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte3g00499 K20032 - cave:132165500 976.467
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte3g00499 3 3958397 3965524 Pte3g00499 3 3958397 3965524 RCT