Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte3g00493 ATGGGGGCGGCTATTTTACCAGATCTTGGTACAGAGATTCTGATTCCTGTTTGTGCAGTTGTGGGAATCGTGTTTGCTTTGGTGCAGTGGTATCTGGTGTCACAGGTCACGCTTTCACCCGGCAGAGATGCTTCTGGCGGAAAGAATGGTTACAATGACTATCTCATTGAAGAAGAGGAGGGTATCAACGATCACAATGTTGTTATTAAATGTGCTGAGATCCAAAACGCTATTTCTGAAGGGGCGACCTCTTTCCTCTTTACCGAGTACAAGTATGTGGGAATCTTCATGGTTGCTTTTGCAGTCTTGATATTTGTTTTCCTTGGTTCTGTGGAGGGATTTAGCACAAGTTCCCAGGTGTGCACATTTGACAAAACCAGGATGTGTAAACCTGCTCTTGCGACAGCTATCTTCAGTACCGTATCCTTCTTGCTTGGTGCTTTTACCTCAGTTGTTTCTGGGTTCCTTGGAATGAAAATTGCAACATATGCAAATGCGAGGACAACACTTGAAGCACGAAAAGGTGTTGGAAAAGCTTTCATTACTGCATTCAGGTCTGGTGCTGTCATGGGATTTCTCCTTGCGGCTAATGGTCTTTTGGTTCTGTATATCACCATTAATCTGTTCAAGCTATACTATGGTGATGACTGGGGTGGCCTATTTGAGTCTATTACTGGTTATGGGCTTGGTGGATCGTCCATGGCTTTGTTTGGTAGAGTTGCTGGAGGAATCTATACGAAGGCTGCTGATGTAGGTGCTGATCTTGTTGGCAAGGTAGAGAGAAACATCCCTGAGGATGATCCAAGAAATCCAGCTGTAATAGCTGATAATGTTGGTGACAATGTTGGAGATATTGCCGGTATGGGATCTGATCTTTTTGGATCATATGCTGAGTCATCCTGTGCTGCCCTTGTCGTAGCTTCCATCTCGTCTTTTGGGAATAATCACGAGTTCACTCCTATGTTATATCCTCTCATTGTCAGTTCTATTGGCATCATTGTTTGTTTGCTTACCACCTTGTTTGCAACTGATTTCTTTGAGATCAAGGCTGTAAAAGAAATTGAGCCTGCATTGAAGAAACAACTTATCATTTCAACAGTCTTTATGACAATTGGCATTGCAATAGTGAGTTTTATTGCTCTTCCTTCGTCCTTCACTATCTTCAACTTTGGCGTGCAGAAAGAGGTCAAGAATTGGTAA 1200 0.4292 MGAAILPDLGTEILIPVCAVVGIVFALVQWYLVSQVTLSPGRDASGGKNGYNDYLIEEEEGINDHNVVIKCAEIQNAISEGATSFLFTEYKYVGIFMVAFAVLIFVFLGSVEGFSTSSQVCTFDKTRMCKPALATAIFSTVSFLLGAFTSVVSGFLGMKIATYANARTTLEARKGVGKAFITAFRSGAVMGFLLAANGLLVLYITINLFKLYYGDDWGGLFESITGYGLGGSSMALFGRVAGGIYTKAADVGADLVGKVERNIPEDDPRNPAVIADNVGDNVGDIAGMGSDLFGSYAESSCAALVVASISSFGNNHEFTPMLYPLIVSSIGIIVCLLTTLFATDFFEIKAVKEIEPALKKQLIISTVFMTIGIAIVSFIALPSSFTIFNFGVQKEVKNW* 400
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte3g00493 399 Pfam Inorganic H+ pyrophosphatase 22 381 IPR004131 GO:0004427|GO:0009678|GO:0016020|GO:1902600
Pte3g00493 399 PANTHER K(+)-INSENSITIVE PYROPHOSPHATE-ENERGIZED PROTON PUMP 6 399 IPR004131 GO:0004427|GO:0009678|GO:0016020|GO:1902600
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte3g00493 Pte-Chr3 3931097 3933630 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte3g00493 4 399 Primary Pumps ATPases AT1G15690 81.343 0.0 668
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte3g00493 K23025 - gmx:100775864 712.22
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte3g00493 3 3931097 3933630 Pte3g00493 3 3931097 3933630 RCT