Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte3g00486 ATGGGCATCCTTGCAGCTTCTCTGTTGCTGTTACTGCAAATGAGAATGGTCTTTGGTTCTGAATTTTTCTTGCAATATTGTGGTTATGATCACATAGCTTATTTACATCTTCTTGGTGATGACTCATTTTACATTAATGGAAAGATGGTTGACAGAAACAGCTTCTGCAAGGCTTTCCGGTTCTATCTTGCAAATGGTTGCAAATTTGACAGTGATTTTGGAAGAGATATCTGCGGTTTGGAACCTTCGTATGTGGATTTTCTCTTAAAGACTAGAAGAAAACTTCTAGAGATGGGGTCCAAAGATGAACCTGCGTCAAATGGTCGTACAAATATTCAAAAACCTGCGTCAACCCAAAAATTTGTGATAGCAGCAAGTGGAATTCTTTTTCTGTTTTGTGCTTGTCTGTGTCCTTGTCTTTATAAAAAGAGGAAAGCCACTGATCATACTATCCTACCCAAAGACTCAATTTCAAGTCCAACTTCATCGGTGGATATGAACTCTGTTAGTGAGAAGATTTCTGCCAGTCCTCTCCGCGTACCGCCCAGTCCTTCAAGATTTGCATTGTCTCCACAACTCAGTAGGCTGAAATCAGTACATCTCAACCTGAATCAGGCTGCTAGGGCTACCCGCAATTTCTCATCCTCCCTACAAATAGGGGAAGGAGGCTTTGGAACTGTCTACAGGGCTCATCTAGAAGATGGAAATGTGGTTGCCATAAAACGTGCGAAAAAGGAACATTTTGAGAATTTGCAGAGGGAATTTATCATTGAAGTGGAGCTTCTGGCCAAAATAGATCACCGCAGCCTAGTGAAGCTTCTAGGTTATGTTGAAACAGATCATGAGCGGCTTATTATAATGGAGTATGTGCCAAATGGTACCCTCAGAGAACATCTGGATGGTAAGCGGGGAAGAATTTTGGATTTCAACCAGAAGCTTGAAATTGCGATTGATATTGCTCATGCACTGACTTATCTCCATCAATATGCAGAAAAGCCAATCATTCATCGAGATGTAAAATCATCCAACATCCTTCTGACGGAAAGCATGAGGGCTAAAGTTGCTAACTTTGGATTTGCAAAGCTTGGTCCAACTGAATCTGACCGATCACACATTTCTACCAACGTCAAGGGAACAGTTGGTTACTTGGACCCTGAGTACATGAAAACATATCAACTCACCACAAAGAGTGATGTTTACTCATTTGGTATCTTGCTTCTTGAAATTCTGACTGGTCGACGTCCCGTGGACTTGAGAAGACCGGTCGAGGAACGAGTCACAGTTAGATGGGCTTTCGAGAAGTACCATGACGGAAGTGTATTAGACCTGGTGGATCCTTTGATGGAGCAAGCATTGAATCAGAAGATTCTTTCGAAAATGTTTGAATTAGCTTTCCAATGTGCAGCACCTATTCGAGCCGATCGGCCAGACATGAAATCAGTGGGAGAGCGGTTGTGGGCGATTAGGGCATACTACCTGAAGAGACAAAAAGAAGTGGTTGGCATCAGAGAGTGA 1515 0.4244 MGILAASLLLLLQMRMVFGSEFFLQYCGYDHIAYLHLLGDDSFYINGKMVDRNSFCKAFRFYLANGCKFDSDFGRDICGLEPSYVDFLLKTRRKLLEMGSKDEPASNGRTNIQKPASTQKFVIAASGILFLFCACLCPCLYKKRKATDHTILPKDSISSPTSSVDMNSVSEKISASPLRVPPSPSRFALSPQLSRLKSVHLNLNQAARATRNFSSSLQIGEGGFGTVYRAHLEDGNVVAIKRAKKEHFENLQREFIIEVELLAKIDHRSLVKLLGYVETDHERLIIMEYVPNGTLREHLDGKRGRILDFNQKLEIAIDIAHALTYLHQYAEKPIIHRDVKSSNILLTESMRAKVANFGFAKLGPTESDRSHISTNVKGTVGYLDPEYMKTYQLTTKSDVYSFGILLLEILTGRRPVDLRRPVEERVTVRWAFEKYHDGSVLDLVDPLMEQALNQKILSKMFELAFQCAAPIRADRPDMKSVGERLWAIRAYYLKRQKEVVGIRE* 505
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte3g00486 504 Gene3D Phosphorylase Kinase; domain 1 185 289 - -
Pte3g00486 504 ProSitePatterns Serine/Threonine protein kinases active-site signature. 334 346 IPR008271 GO:0004672|GO:0006468
Pte3g00486 504 CDD STKc_IRAK 219 485 - -
Pte3g00486 504 PANTHER OS01G0750732 PROTEIN 119 486 - -
Pte3g00486 504 Pfam Protein tyrosine and serine/threonine kinase 218 485 IPR001245 GO:0004672|GO:0006468
Pte3g00486 504 ProSitePatterns Protein kinases ATP-binding region signature. 219 245 IPR017441 GO:0005524
Pte3g00486 504 Gene3D Transferase(Phosphotransferase) domain 1 290 500 - -
Pte3g00486 504 SUPERFAMILY Protein kinase-like (PK-like) 199 488 IPR011009 -
Pte3g00486 504 FunFam Calmodulin-binding receptor-like cytoplasmic kinase 3 290 499 - -
Pte3g00486 504 SMART serkin_6 213 457 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte3g00486 504 ProSiteProfiles Protein kinase domain profile. 213 492 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte3g00486 Pte-Chr3 3892622 3897560 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte3g00486 209 500 Receptor kinase-like Gene Family AT3G46290 44.521 2.33e-71 241
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-IV Pte3g00486 PK_Tyr_Ser-Thr 5.2e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte3g00486 - - qsa:O6P43_002448 661.373