Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte3g00483 ATGTCAGACGAAGAGCATCACTTTGAGTCCAAGGCCGATGCTGGGGCGTCAAAGACCTTCCCTCAGCAAGCTGGAACCATTCGCAAAAACGGTTACATCGTCATCAAAGGTCGTCCCTGCAAGATTAAGGAAGGTTTTGCTGAAGGAAAGGATCTATGTGTATCTGTCATGTCTGCTATGGGTGAAGAGCAGATTTGTGCTTTGAAGGATATCGGACCAAAGTCCTAA 228 0.4693 MSDEEHHFESKADAGASKTFPQQAGTIRKNGYIVIKGRPCKIKEGFAEGKDLCVSVMSAMGEEQICALKDIGPKS* 76
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte3g00483 75 Gene3D - 1 51 IPR014722 -
Pte3g00483 75 MobiDBLite consensus disorder prediction 1 22 - -
Pte3g00483 75 Pfam Eukaryotic elongation factor 5A hypusine, DNA-binding OB fold 41 69 IPR020189 GO:0003723|GO:0003746|GO:0043022|GO:0045901|GO:0045905
Pte3g00483 75 SUPERFAMILY Translation proteins SH3-like domain 15 44 IPR008991 -
Pte3g00483 75 SUPERFAMILY Nucleic acid-binding proteins 41 71 IPR012340 -
Pte3g00483 75 PANTHER TRANSLATION INITIATION FACTOR 5A FAMILY MEMBER 1 44 IPR001884 GO:0003723|GO:0003746|GO:0043022|GO:0045901
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte3g00483 Pte-Chr3 3848173 3849729 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte3g00483 41 74 Eukaryotic Initiation Factors Gene Family AT1G13950 82.353 3.52e-13 58.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte3g00483 K03263 K02180 oeu:111403320 91.6633