Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte3g00481 ATGGCGCTGTTCAGGCGTTTCTTTTACCGAAAGCCACCGGATCGGCTGCTAGAAATCTCTGAGAGGGTCTACGTTTTTGACTGTTGCTTCTCCACTGATGTCTTGGAAGAAGATGAATACAAAGTTTACTTGGGTGGGATTGTTGCTCAGCTGCAGGATCACTTTCCTGATGCTTCTTTTATGGTTTTTAACTTTCGAGAAGGGGAGAAGCGCAGTCATGTGTCTGACATATTGTCTCAGTACGATATGACTGTCATGGAGTACCCTAGGCAATATCAAGGTTGTCCTCTTCTTCCTTTGGAGATGGTCCATCACTTCCTTCGATCTAGTGAAAGTTGGTTGTCACTGGAAGGGCAGCAAAACGTTGTTTTGATGCACTGTGAGAGAGGAGGTTGGCCAGTGCTAGCGTTCATGCTTGCAGGCCTTTTGCTTTACAGAAAACAGTATAATGGAGAGCAGAAGACACTTGAAATGGTTTATAAGCAAGCTCCCAAGGAGCTCCTCCATCTTTTGTCTGCTCTAAACCCCCAGCCTTCTCAGTTGAGATATCTTCAGTACATTTCCAGAAGAAATTTGGGTTCTGATTGGCCTCCCTCTTATACGCCTTTATTTCTCGACTGTCTCATCCTCAGAGTCCTTCCACCATTTGATGGTGGGAAGGGTTGCAGGCCTGTTGTACGAGTTTATGGTCAAGATCCATTGACATCGTCAAATAGAAGTTGTAAGCTCTTGTTTTCAACTTCAAAGACCAAAAAGCCAATTCGCCACTATTTACAGGCGGAATGCATGCTTGTAAAAATTGATATCCATTGCCGCATTCAAGGAGATGTTGTTCTCGAGTGCATACATTTAGATGACGATTTGGTGCGGGAGGAGATGATGTTCAGGGTTGTGTTCCATACAGCTTTTGTGTGGTCAAATATATTGATTCTCAATCGTGACGAAGTTGATATTTTATGGGATTCCAAGGATCAGTTTCCAAGGGATTTTCGAGCAGAGGTACTTTTTTCGGACATTGATGCTGTTATGGCTAATCTCACCACAGTCAGAGCAAGTGAAGATGGCAATGAAGCAGAAAGTGCTTCACCTGAAGAGTTCTTTGAGGTGGAAGAGATCTTTAGCAGTGTAGTTGATGCACAGGAAGCAAATGGAGAAATTGATAATCATAAAGCTCATGAAAATAAACCAGATGGTATAAATCACAAAGAGGCAGTGAAGGAAGATTTGGATCCTCACAGTTTTCAGGATTGCCCATCAGATGATGCTTTGCAGAAACAAAATGGAAAAATGAATTCCGATAGTGATACAGTAAAAGACATTGCTGTGGATGATGTGAAGTATACATTGGATAAGTCTGTGGACTCTGATCTTAATGCAATCAAAGACATAACTGTGGATGTTGGAGAAATTAAGTCAAGTTCCGCAGGCAGCATGGATGATGTTCTGAAGAGTATAGACACCAAGGAAGTTTTGGATGATGGTGAAGAGAGACAGAAGAACTTGGTATCCAAGGACGGACAGGAAAAGTTGATTCTTGACATAGGCAGACCAAAATCTGTTAAAACAATGGTCGCAGCAAAACAAAAGACTAAACAGCAAGAAAGCCAAGGTGTTCATGCAAAACCAGCGAAGCCAAGTACAGTACCTAGATGGTTCCCTCCCAACAAAGGCTCCTATTCAAATGCATTGCATGTCTCTCATCCACCATCAAGATATAATAGTGCTCCACCATCTTTTGGTAACCCAGCTTCTGTGCAAGAGAATGCGGGAGATGAAAAACCAAAGCTTTCGTTGTGTATTAATGCTGCACCAATTGGTTCTGTGGATTTGGAAAATGGACTGGAAAATCCAAACTTCGACGTCTTGAAGTCTTCTTCAATTACTTCACCTGAAACAGATACAATCTCACCAATCAAAGCAGCACTTTCTTCCCCAGCAACCCTATTTCCGCAGCTTAGCCCAAAGAAAACAGTACAACATTCCCCATCATCTCCTCCTCCTGATCTATCTTTACCTTCACCAATTCCAATTCAAATAGAGTCTGTAGATTCTCATTTGTTGCGGCCTGTGCCTCCTACACCTCCACCCCAACCACCACCTCCTCCTCCATTATTTCCAAAATCAACCAGTGAACTTTCAGGGACAAATTTACATGCTGCATCTCCCCTGCCTCCTCCTCCTCCTCCTCCTCCTCCATTTAGTAGACAAAATATTGGAAGTGTGTCGCCTCCTCCACCCCCGCCTCTACCACCTCCTTATGCAACGTTTCATTCTCCTCCAAGTGGGTCAATCACGCAAAATACTCCTGCAATTTCTAGTCCACCACCTCCTCTGCCTCAACATCATACAACAACTTCCATTGAACACTCTACGTCACTTCCTAAATCTCAGCCTCCTTATTTTGGTGGTCCACCTCCCCCACCGCCGTTGTCTGTATTAGGCAGAGTCATTAGTTCTCCTCAAGCACCATCTTTACCTACATCACATGGAGTTCCTATACAATCAACTTCCTCACCTCCATCTCCTCCTATAACACAAGCTCCTCCGCCTCCGCCTCCGCCTCCTCCTCCCATGTTTGGAGCCCCAACTCAACCTCAACCACCTCTTCATATGCATAGGGCCCCTACACCTCCTCCGCCGCCGCCTCCACCTAGTTCAATGCATGGAGCTTCTTGTCCACAATCACAACCTCTTGTGCATGAAGCTCTTACTTCAGCACCACCTCCTTCTCCTGCATTGCATCTTCCTCCACCACCCCCACCACCTCCATCTTACAGAGCTCCATCAATGCACGGAGCGCCCCCACCCCCACCACCACCTCCAATGCGTGGAGCACCCCCACCTCCACCACCCCCTCCAATACTTGGGGCACCATCACCTCCACCTCTAATGAGTAGAGCACCAACACCTACACCACCTCTTGGGGGGAAAGGCCCACCTCCTCCACCTCCACCACCATCGAGAGCATCTCCTTCTCCACCCTTTCCTGGAGGTCGAGCTTCTAATGCACCTCCTCCGCCTCCACCACCATTTGGAGCACCTCCTCCTCCACCCCCTCCTGGAGGTCGAGCTCCCAGTGCACCTCCTCCTCCGCCCCCTCTTGGAGGTCGAGCTCCCGGTGCACCTCCTCCTCCGCCCCCTCCCGGAGGTCGAGCTCCCGGTGCACCTCCTCCCCCACCCCCGCCTGGAGGTGGAGCTCCCGGTGCCCCTGCTCCTCCCCCTCCCCCTGGAGGTCGAGCTCCTGCACCTCTTGGTGGTGCTCCTCCTCCACCTCCACCTGGTGGTAGAGGTGGGAGAGGACGTGGCCTTGCACGCCCTACAGGGATGGGTGCAGCAACTCCTCGTCGGTCTTCCTTGAAACCTTTGCATTGGAGTAAGGTTACAAGGGCATTGCAAGGAAGCTTATGGGAAGAACTACAGAGACATGGAGAGCCTCAAATTGCTCCAGAGTTTGATGTTTCGGAGATTGAGACCCTTTTCTCTGCAAATGTCCCAAAACCTGCTGGCACTAAAGCTGGGGGTCAAAAGAAGTCTGCCGGATCTAAAAATGAAAAAGTGAACCTGATTGATTTGAGAAGGGCCAACAACACTGAAATTATGCTTACGAAAGTTAAGATGCCACTTCCTGATATGATGGCAGCGGTATTAGCAATGGATGAATCTGTGTTAGATGTTGACCAGGTGGAGAACCTCATAAAATTTTGTCCAACCAAAGAGGAGATGGAAATGTTGAAGGGCTACACTGGGGACAAGGAGAATTTGGGGAAATGCGAACAGTACTTTTTGGAGCTCATGAAAGTTCCTCGGGTGGAGTCTAAGTTAAGAGTATTTGCTTTCAAAATTCAGTTTGGCTCACAGATTACAGAATTTAAGAGAAGTTTGAACTCTGTCAATTCAGCTTGTATTGAGGTCCGTCAATCTTTCAAATTGAAGGAGATCATGAAAAAAATTCTTTACCTGGGAAACACATTGAATCAAGGAACTGCAAGAGGCTCTGCTGTTGGATTCAAGTTGGATAGTCTCCTGAAGCTCACTGACACACGTGCTTCTAACAATAAGATGACACTTATGCATTATCTCTGCAAGGTCCTTGCAGAAAAGTCACCCAGCCTTCTTGACTTTCACCTAGATCTCATCAGCCTAGAGCCTGCATCAAAGATACAATTGAAGTCATTAGCAGAAGAAATGCAGGCGATAATCAAAGGGTTGGAAAAGGTGAAGCAAGAGCTGGCAGCATCAGCAAATGATGGGGCAGTATCTGAGGGTTTTCACAAGACACTGAAAGGTTTCGTTGCCACTGCTGAGACTGAGGTAGCATCTGTGACAGATTTATACGCTGTGGTGGGAAGAAATGCTGATGCCCTAGCACTTTATTTTGGGGAGGATCCTGCCCGATGCCCGTTTGAGCAAGTTACTGCGACACTTTTAAACTTTATAAGGTTGTTTAGGAAGGCACATGAAGAGAACGTGAAACAGGCTGAGTTAGAGAAGAAGAAAGCTGAGAAGGAGAGCGAAATGGAGAAGGCTAAGGGTGTTAACCTGACCAAAAAGAGCGCAAAGTAG 4563 0.4694 MALFRRFFYRKPPDRLLEISERVYVFDCCFSTDVLEEDEYKVYLGGIVAQLQDHFPDASFMVFNFREGEKRSHVSDILSQYDMTVMEYPRQYQGCPLLPLEMVHHFLRSSESWLSLEGQQNVVLMHCERGGWPVLAFMLAGLLLYRKQYNGEQKTLEMVYKQAPKELLHLLSALNPQPSQLRYLQYISRRNLGSDWPPSYTPLFLDCLILRVLPPFDGGKGCRPVVRVYGQDPLTSSNRSCKLLFSTSKTKKPIRHYLQAECMLVKIDIHCRIQGDVVLECIHLDDDLVREEMMFRVVFHTAFVWSNILILNRDEVDILWDSKDQFPRDFRAEVLFSDIDAVMANLTTVRASEDGNEAESASPEEFFEVEEIFSSVVDAQEANGEIDNHKAHENKPDGINHKEAVKEDLDPHSFQDCPSDDALQKQNGKMNSDSDTVKDIAVDDVKYTLDKSVDSDLNAIKDITVDVGEIKSSSAGSMDDVLKSIDTKEVLDDGEERQKNLVSKDGQEKLILDIGRPKSVKTMVAAKQKTKQQESQGVHAKPAKPSTVPRWFPPNKGSYSNALHVSHPPSRYNSAPPSFGNPASVQENAGDEKPKLSLCINAAPIGSVDLENGLENPNFDVLKSSSITSPETDTISPIKAALSSPATLFPQLSPKKTVQHSPSSPPPDLSLPSPIPIQIESVDSHLLRPVPPTPPPQPPPPPPLFPKSTSELSGTNLHAASPLPPPPPPPPPFSRQNIGSVSPPPPPPLPPPYATFHSPPSGSITQNTPAISSPPPPLPQHHTTTSIEHSTSLPKSQPPYFGGPPPPPPLSVLGRVISSPQAPSLPTSHGVPIQSTSSPPSPPITQAPPPPPPPPPPMFGAPTQPQPPLHMHRAPTPPPPPPPPSSMHGASCPQSQPLVHEALTSAPPPSPALHLPPPPPPPPSYRAPSMHGAPPPPPPPPMRGAPPPPPPPPILGAPSPPPLMSRAPTPTPPLGGKGPPPPPPPPSRASPSPPFPGGRASNAPPPPPPPFGAPPPPPPPGGRAPSAPPPPPPLGGRAPGAPPPPPPPGGRAPGAPPPPPPPGGGAPGAPAPPPPPGGRAPAPLGGAPPPPPPGGRGGRGRGLARPTGMGAATPRRSSLKPLHWSKVTRALQGSLWEELQRHGEPQIAPEFDVSEIETLFSANVPKPAGTKAGGQKKSAGSKNEKVNLIDLRRANNTEIMLTKVKMPLPDMMAAVLAMDESVLDVDQVENLIKFCPTKEEMEMLKGYTGDKENLGKCEQYFLELMKVPRVESKLRVFAFKIQFGSQITEFKRSLNSVNSACIEVRQSFKLKEIMKKILYLGNTLNQGTARGSAVGFKLDSLLKLTDTRASNNKMTLMHYLCKVLAEKSPSLLDFHLDLISLEPASKIQLKSLAEEMQAIIKGLEKVKQELAASANDGAVSEGFHKTLKGFVATAETEVASVTDLYAVVGRNADALALYFGEDPARCPFEQVTATLLNFIRLFRKAHEENVKQAELEKKKAEKESEMEKAKGVNLTKKSAK* 1521
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte3g00481 1520 SMART it6_source 520 1520 IPR015425 -
Pte3g00481 1520 ProSiteProfiles Formin homology-2 (FH2) domain profile. 1109 1508 IPR015425 -
Pte3g00481 1520 Gene3D Formin, FH2 domain 1111 1494 IPR042201 -
Pte3g00481 1520 Gene3D - 204 337 - -
Pte3g00481 1520 MobiDBLite consensus disorder prediction 720 757 - -
Pte3g00481 1520 MobiDBLite consensus disorder prediction 1164 1183 - -
Pte3g00481 1520 Coils Coil 1483 1512 - -
Pte3g00481 1520 MobiDBLite consensus disorder prediction 559 585 - -
Pte3g00481 1520 MobiDBLite consensus disorder prediction 609 1124 - -
Pte3g00481 1520 MobiDBLite consensus disorder prediction 528 592 - -
Pte3g00481 1520 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 200 339 IPR035892 -
Pte3g00481 1520 MobiDBLite consensus disorder prediction 618 664 - -
Pte3g00481 1520 Pfam C2 domain of PTEN tumour-suppressor protein 200 337 IPR014020 -
Pte3g00481 1520 PANTHER FORMIN-J 1027 1514 - -
Pte3g00481 1520 MobiDBLite consensus disorder prediction 798 813 - -
Pte3g00481 1520 MobiDBLite consensus disorder prediction 782 797 - -
Pte3g00481 1520 Coils Coil 1389 1413 - -
Pte3g00481 1520 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 13 188 IPR029021 -
Pte3g00481 1520 FunFam Formin-like protein 1108 1494 - -
Pte3g00481 1520 SMART PTEN_C2_2 198 338 IPR014020 -
Pte3g00481 1520 MobiDBLite consensus disorder prediction 1494 1520 - -
Pte3g00481 1520 MobiDBLite consensus disorder prediction 817 835 - -
Pte3g00481 1520 MobiDBLite consensus disorder prediction 836 888 - -
Pte3g00481 1520 MobiDBLite consensus disorder prediction 909 1096 - -
Pte3g00481 1520 MobiDBLite consensus disorder prediction 688 707 - -
Pte3g00481 1520 Pfam Formin Homology 2 Domain 1115 1482 IPR015425 -
Pte3g00481 1520 ProSiteProfiles C2 tensin-type domain profile. 200 339 IPR014020 -
Pte3g00481 1520 SUPERFAMILY Formin homology 2 domain (FH2 domain) 1183 1510 - -
Pte3g00481 1520 Gene3D Protein tyrosine phosphatase superfamily 14 203 IPR029021 -
Pte3g00481 1520 MobiDBLite consensus disorder prediction 1494 1514 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte3g00481 Pte-Chr3 3822947 3835355 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte3g00481 1 579 FH2 protein (formin) Gene Family AT5G07740 63.043 0.0 761
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte3g00481 - - qsa:O6P43_001985 947.192
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte3g00481 3 3822947 3835355 Pte3g00481 3 3822947 3835355 RCT