Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte3g00462 ATGGCAACAGTCACAACACAGGCCTCTGCCTCGGTTTTCCGACCATCTTCCAAGATCCTCACGGGGTCTAACTTTGGCAGTCTGAACAGAGAAGTGGCAGTTAAACCAGTTACATTTTCTTCTTCTCGCTCTCTCAAAGTTCAAGCTAAAGGGCAGTGGCTCCCTGGTTTGGCCTCACCTACTTACCTGAACGGCAGTCTTCCTGGTGACAATGGATTCGATCCACTGGGGCTTGCTGAGGACCCTGAGAGCCTGAAATGGTTTGTTCAAGCTGAGCTTGTTAATGGACGCTGGGCCATGTTGGGAGTTGCAGGAATGCTTCTACCAGAAGTCTTCACTAACATTGGAATCATCGATGTACCTAAATGGTATGATGCTGGGAAAGCTGAATACTTTGCATCGTCATCAACCCTCTTCGTCATAGAGTTCATCTTGTTCCACTACGTTGAAATCAGAAGATGGCAAGATATTAAGAACCCAGGAAGTGTTAACCAAGATCCCATCTTCAAGCAATACAGCTTGCCCCCCAATGAGGTCGGATACCCTGGTGGCATCTTCAACCCTTTGAACTTCGCACCAACTCTTGAGGCAAAAGAGAAAGAGTTAGCCAATGGGAGATTGGCAATGTTGGCATTCTTGGGTTTTGTGGTCCAGCACAATGTTACAGGGAAAGGTCCGTTCGATAACCTCTTGCAGCACCTATCAGATCCATGGCACAACACCATTATCCAAACACTTAGGGGCTAG 747 0.4752 MATVTTQASASVFRPSSKILTGSNFGSLNREVAVKPVTFSSSRSLKVQAKGQWLPGLASPTYLNGSLPGDNGFDPLGLAEDPESLKWFVQAELVNGRWAMLGVAGMLLPEVFTNIGIIDVPKWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPNEVGYPGGIFNPLNFAPTLEAKEKELANGRLAMLAFLGFVVQHNVTGKGPFDNLLQHLSDPWHNTIIQTLRG* 249
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte3g00462 248 Gene3D Chlorophyll a/b binding protein domain 60 239 - -
Pte3g00462 248 Pfam Chlorophyll A-B binding protein 60 219 IPR022796 -
Pte3g00462 248 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 11 245 IPR001344 GO:0009765|GO:0016020
Pte3g00462 248 FunFam Chlorophyll a-b binding protein, chloroplastic 60 239 - -
Pte3g00462 248 SUPERFAMILY Chlorophyll a-b binding protein 45 246 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte3g00462 Pte-Chr3 3728520 3729512 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte3g00462 53 242 Chloroplast and Mitochondria Gene Families AT3G61470 56.633 2.91e-74 224
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte3g00462 K08910 - pvy:116133502 452.595
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte3g00462 3 3728520 3729512 Pte3g00462 3 3728520 3729512 RCT