LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Pte3g00448	ATGGTTCAGCGTCTCACATACAGGACACGGCATAGCTATGCAACTAAGTCTAACCAGAACCGGGTTGTGAAAACGCCCGGTGGTAGACTTGTTTATCAGAGTACCAAGAAGCGAGCTAGTGGCCCTAAATGTCCTGTGACAGGAAAGAGAATCCAAGGGATTCCACACTTGAGACCTACTGAATACAAGAGGTCCAGATTGCCACGGAACAGAAGAACAGTAAACCGGGCCTATGGCGGTGTTTTATCTGGTGGAGCTGTAAGAGAGAGAATCATTCGGGCGTTTTTGGTCGAGGAGCAAAAGATTGTGAAGAAAGTCCTGAAGATTCAAAAGGCCAAGGAAAAGCAGGCAGCAAGAAGCTAA	363	0.4738	MVQRLTYRTRHSYATKSNQNRVVKTPGGRLVYQSTKKRASGPKCPVTGKRIQGIPHLRPTEYKRSRLPRNRRTVNRAYGGVLSGGAVRERIIRAFLVEEQKIVKKVLKIQKAKEKQAARS*	121

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Annotation information

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Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Pte3g00448	120	Gene3D	-	1	37	-	-
	Pte3g00448	120	PRINTS	Ribosomal protein L34 signature	13	26	IPR008195	GO:0003735\|GO:0005840\|GO:0006412
	Pte3g00448	120	PRINTS	Ribosomal protein L34 signature	44	54	IPR008195	GO:0003735\|GO:0005840\|GO:0006412
	Pte3g00448	120	PRINTS	Ribosomal protein L34 signature	26	43	IPR008195	GO:0003735\|GO:0005840\|GO:0006412
	Pte3g00448	120	PRINTS	Ribosomal protein L34 signature	66	88	IPR008195	GO:0003735\|GO:0005840\|GO:0006412
	Pte3g00448	120	Pfam	Ribosomal protein L34e	1	96	IPR008195	GO:0003735\|GO:0005840\|GO:0006412
	Pte3g00448	120	PANTHER	60S RIBOSOMAL PROTEIN L34	1	116	IPR008195	GO:0003735\|GO:0005840\|GO:0006412
	Pte3g00448	120	ProSitePatterns	Ribosomal protein L34e signature.	15	28	IPR018065	-
	Pte3g00448	120	Gene3D	-	39	120	-	-

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Pte3g00448	Pte-Chr3	3661387	3663515	Wgd

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Pte3g00448	1	117	Cytoplasmic Ribosomal Protein Gene Family	AT1G69620	90.598	2.44e-74	214

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Pte3g00448	K02915		-	apan:127240060	209.149

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