Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte3g00448 ATGGTTCAGCGTCTCACATACAGGACACGGCATAGCTATGCAACTAAGTCTAACCAGAACCGGGTTGTGAAAACGCCCGGTGGTAGACTTGTTTATCAGAGTACCAAGAAGCGAGCTAGTGGCCCTAAATGTCCTGTGACAGGAAAGAGAATCCAAGGGATTCCACACTTGAGACCTACTGAATACAAGAGGTCCAGATTGCCACGGAACAGAAGAACAGTAAACCGGGCCTATGGCGGTGTTTTATCTGGTGGAGCTGTAAGAGAGAGAATCATTCGGGCGTTTTTGGTCGAGGAGCAAAAGATTGTGAAGAAAGTCCTGAAGATTCAAAAGGCCAAGGAAAAGCAGGCAGCAAGAAGCTAA 363 0.4738 MVQRLTYRTRHSYATKSNQNRVVKTPGGRLVYQSTKKRASGPKCPVTGKRIQGIPHLRPTEYKRSRLPRNRRTVNRAYGGVLSGGAVRERIIRAFLVEEQKIVKKVLKIQKAKEKQAARS* 121
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte3g00448 120 Gene3D - 1 37 - -
Pte3g00448 120 PRINTS Ribosomal protein L34 signature 13 26 IPR008195 GO:0003735|GO:0005840|GO:0006412
Pte3g00448 120 PRINTS Ribosomal protein L34 signature 44 54 IPR008195 GO:0003735|GO:0005840|GO:0006412
Pte3g00448 120 PRINTS Ribosomal protein L34 signature 26 43 IPR008195 GO:0003735|GO:0005840|GO:0006412
Pte3g00448 120 PRINTS Ribosomal protein L34 signature 66 88 IPR008195 GO:0003735|GO:0005840|GO:0006412
Pte3g00448 120 Pfam Ribosomal protein L34e 1 96 IPR008195 GO:0003735|GO:0005840|GO:0006412
Pte3g00448 120 PANTHER 60S RIBOSOMAL PROTEIN L34 1 116 IPR008195 GO:0003735|GO:0005840|GO:0006412
Pte3g00448 120 ProSitePatterns Ribosomal protein L34e signature. 15 28 IPR018065 -
Pte3g00448 120 Gene3D - 39 120 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte3g00448 Pte-Chr3 3661387 3663515 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte3g00448 1 117 Cytoplasmic Ribosomal Protein Gene Family AT1G69620 90.598 2.44e-74 214
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte3g00448 K02915 - apan:127240060 209.149