Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte3g00435 ATGGAAGGCACAGAAACAGGAAAAGCGCCACCCAGGAAGAATTTGTGGAAACCTGAAGAGGACTTAATTCTGAAAAACTATGTTGAAACCCACGGTGAAGGTAACTGGGCCACTGTTTCAAAAAATTCAGGCCTCAAGAGGGGAGGGAAAAGCTGCAGGCTCAGATGGAAAAATTATTTAAGACCAGACATCAAACATGGAGACATGTCCGAGGAGGAAAGAGACCTCATCATTCGAATGCATAAGCTTATTGGAAATCGATGGTCATTGATAGCAGGTCGGCTTCCAGGAAGAACAGACAATGAAGTTAAGAACTACTGGAATACTCATTTGAACAAGAAAAACACAACAAGCAAAAGAAAAGACTTTGGATCCAACAATCATCGAGACAACAGCAAGAAAATCCGGTCTTTTGATCCAGAGTCCTCGGTGCGACAGGGTCATCTCGAAGTGGAATCAGACTTTTGGGAAGATAGCACACAAGGGGAACAAGGCATCAGCAACCTTGCTAATTATTTGATAAGTGACACGGAGAGTTTCAACAGTGATACTGTTTTAGATTATCCAGATGTTTCAGCCAATATTGGCGATGCTGCTAGAACCTTTATCTACAATGACGAGCCTCTCGTCACCTACTTCGATCCTTTTCTGTTTGAAGTACTAGAATATATGGTGGGTTAG 681 0.4244 MEGTETGKAPPRKNLWKPEEDLILKNYVETHGEGNWATVSKNSGLKRGGKSCRLRWKNYLRPDIKHGDMSEEERDLIIRMHKLIGNRWSLIAGRLPGRTDNEVKNYWNTHLNKKNTTSKRKDFGSNNHRDNSKKIRSFDPESSVRQGHLEVESDFWEDSTQGEQGISNLANYLISDTESFNSDTVLDYPDVSANIGDAARTFIYNDEPLVTYFDPFLFEVLEYMVG* 227
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte3g00435 226 ProSiteProfiles Myb-like domain profile. 61 111 IPR001005 -
Pte3g00435 226 Pfam Myb-like DNA-binding domain 14 60 IPR001005 -
Pte3g00435 226 Pfam Myb-like DNA-binding domain 67 111 IPR001005 -
Pte3g00435 226 Gene3D - 13 65 - -
Pte3g00435 226 SUPERFAMILY Homeodomain-like 12 107 IPR009057 -
Pte3g00435 226 PANTHER TRANSCRIPTION FACTOR MYB8-RELATED-RELATED 12 139 - -
Pte3g00435 226 CDD SANT 16 60 IPR001005 -
Pte3g00435 226 CDD SANT 69 111 IPR001005 -
Pte3g00435 226 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 61 115 IPR017930 -
Pte3g00435 226 ProSiteProfiles Myb-like domain profile. 8 60 IPR001005 -
Pte3g00435 226 MobiDBLite consensus disorder prediction 115 146 - -
Pte3g00435 226 SMART sant 65 113 IPR001005 -
Pte3g00435 226 SMART sant 12 62 IPR001005 -
Pte3g00435 226 Gene3D - 68 139 - -
Pte3g00435 226 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 12 60 IPR017930 -
Pte3g00435 226 FunFam MYB-related transcription factor 12 65 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte3g00435 Pte-Chr3 3567787 3568674 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte3g00435 5 120 MYB Transcription Factor Family AT5G52600 77.586 1.35e-63 195
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Pte3g00435 Myb_DNA-binding 3.6e-13 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte3g00435 K09422 - qsa:O6P43_002410 257.299