Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte3g00429 ATGTTATCAATGGCTAAGAATTGTAAGCAAGAAACAACGACCGAACATGTTTGCTTGTCTCCTGCATGGTTATTTCGTGTTTCCAATAACGATTGTACAGTTGTTGCAGCAGATTCTCTGGAGACTGACAAACAAGTTCTGCTAAAGCTGAAATCTTATCTACAAGAGACAAACCGTTTCAACTCAGGACCCTACTCAGACTGGAACAACCAGAGTACTGATCCCTGTCGTTGGTTAAGAGTGTCATGCAGCAATACAAGGGTCACTGGTATTTACCTCTCTCATAGTAACATATCCGGTGAGATGTTCCAAAAGTTCTCACAGCTCACTGAGCTCACTCACCTTGACCTTTCAATGAACACGATTAGTGTGATTCCACCAGATTTAAGATTGTGCCAGAAGCTTGTGTATCTCAATCTCTCGCACAATATTATCACCGGTGAGTTGAACTTAACTGGGTTAAATAGATTGGAGACACTTGACTTGGCAGTCAATAGGATTCATGGAGATGTTGGGTTGAACTTCCCTGCTATTTGTGACACTCTGGTGACCCTGAATATTTCAGAAAATAACTTTACTGGAAGCATTGGTAAGTCCTTTGACCGATGTTTGAAGTTGCAGTACTTGGATTTGAGCACAAACAAGTTAAGTGGGGACTTGTGGATCGGTTTTGAAAGGCTGACAAAGTTGTCTGTTTCGGAGAATTTTCTGAGTGGAACTATTCAGCAGTCCTATTTCACTGAGAATTGCATTCTACAAATTTTAGACCTGTCTCAAAATAGTTTTCAAGGAGTATTACCAAGGGAGATAGCACATTGCAAGAACTTGGTGACATTAAATTTATGGGGCAACGATCTTACTGGGAATATACCCACTGAGCTAGGTTATATTCCCAACCTAGAAGCATTGTACTTGGGGAACAACAGTTTCTATAGAGATATTCCTGATACCCTTGTGAATTTGAGCAAGTTGACCTTTTTGGATTTAAGCATGAACAGTTTTGGTGGTGAGATACAAAATATTTTTGGGAGATTGACACAGGTGAAGTTTCTCCTATTGGACTCAAATTCTTATACTGGAGGAATAAATTCGTCCGGAATTCTGAACCTGCAAAATATTTCGCGGTTAGATCTTAGCTACAATGATTTCTCTGGTCCATTACCCATCGAAATATCTCAAATGTCGAGCTTGAAGTTCTTGATCTTAGCACATAATGATTTCACAGGAATTATACCACCTGAATATGGTTTCACGCCAAGTCTCCAAGCACTCGATCTCTCCTATAACAGATTGAGTGGTCCGATTCCATCAAGCCTTGGGAACCTGAAGTCTCTGCTATGGTTGATGCTTGGAAATAATTCATTAACTGGAGAAATTCCCAGTGAATTGGGAAACTGTTCAAGCTTGTTATGGCTAAACCTCGAGAATAACCAGCTCTCGGGGTTCTTCCCCTCGGAGTTAACAAATATTGGAGTTACTTCCATGTCAACCTTCGAATCAAACCGGGATGGTGACCACTTCTCCGCTGGCTCGGGTGAGTGTTTGACCATGAAGAGATGGATACCTGCAGATTACCCTCCATTCAATTTCCTCGACACAATCCTCACAAGGAAGAATTGCAGAATCTATTGGGAAAGTTTGCTTCAAGGATATGGTATCTTCCCAATTTGTGGAGGTGGATCATCCATACGCACATTCCAAATATCCGGTTATATTCAGCTCAGTGGGAATCAACTCACAGGGAAAATTCCCTCTAGTATTGGCAAGTTGCAAAATATGAGTATGCTGCAACTTGGAACTAACAGCTTCTATGGAGAACTTCCACCAGAGATTGGACAGATGTCTCTTGTAGTCTTAAATATATCCAAAAATAATTTCTCAGGCGAAATACCCATGCAAATTGCAGACCTGAAATGTTTGCAGATCCTTGATGTTTCGCAGAACAACTTTTCTGGAACATTTCCTACAAGCTTGAACAACTTGAATGATCTCAGCAAGTTCAATATCTCATACAATCCTCTGATATCTGGTGTAGTCCCATCAACTGGGCAGTTGGTAACTTTTGAAAAGAATTCATATTTTGGTGACCCTCTTTTGGTTCTTCCAAAATTCATTGACAACTCTACAAACCAGTCCCCTAACGATACATTGCCGATTGGAGAACCAAAAACAGCGAAACTGCAGGCTGGACCTTTTATTACCTTAGCACTTTCAATATTTTTCTTGCTATGTGGAGTTATGTGTCTCACAGTCTGTTTCACAATGAAAAATTCGTCAAAAGCGCCAGGTTATCTATTAGAGGATACAAAATACGAGCATGATCTTGAAGCAAGTTCTGGCTCTTCTTCACCAAGTTCTTCTGATAATGTCAAGGTCATCCGTTTGGACAGAACAGCTTTCACATATGGTGACATTTTGAAAGCTACTGAGAATTTCGCAGAGGACAGAATAATTGGAAAGGGAGGATATGGAACTGTTTACAAGGGTTTATTACCTGATGGAAGAGAAATTGCAGTAAAGAAGCTCCAAAGAGAAGGAGCTGAGGGAGAGAGAGAATTCAGAGCTGAAATGGAAGTCCTAAGTGGAAATAGTTTTAGCTGGCCACATTCAAACCTAGTCACACTCTATGGTTGGTGCCTTCATGGATCAGAGAAGGTATTGGTTTATGAGTACATGGAAGGTGGAAGCTTGGAGGACCTTGTAGCTGACAGAGTAAGATTAACATGGCACAGGCGTATTGATGTGGCAATTGACGTAGCACGTGCATTGACGTATCTTCATCATGAATGCTATCCTGCAATCGTGCACCGTGATGTCAAGGCCAGTAATGTCCTGCTTGACAAGAGTGGCAAAGCAAGAGTAACAGATTTTGGCCTTGCTAGGGTAGTGGATGCTGGTGTTAGCCATGTTAGCACAATGGTGGCTGGAACAGTTGGCTATGTTGCCCCTGAGTACGGGCAGATATGGCATGCCACCACAAAAGGTGATGTATATAGTTATGGGGTGCTGGCAATGGAGCTAGCAACGGGAAGGAGAGCACTGGACGGAGGGGAAGAGTGTCTGGTTGACTGGGCAAGGAGAGTCATGGGTCATGGCAGGAAGGAACTGAGACTTTCAGCAATGCCAGTTATAGTGATGGGATCTGGTCTAGCTGAAGGTAGGGAGGAGATGTCCGAGCTGCTGAGAATTGGAGTCAAATGCACAGCTGATTCACCACAAGCTAGACCTAACATGAAAGAGGTTCTGGCTATGTTGATCAAGATATCAAATAATAATCATAGTGATTAA 3288 0.4197 MLSMAKNCKQETTTEHVCLSPAWLFRVSNNDCTVVAADSLETDKQVLLKLKSYLQETNRFNSGPYSDWNNQSTDPCRWLRVSCSNTRVTGIYLSHSNISGEMFQKFSQLTELTHLDLSMNTISVIPPDLRLCQKLVYLNLSHNIITGELNLTGLNRLETLDLAVNRIHGDVGLNFPAICDTLVTLNISENNFTGSIGKSFDRCLKLQYLDLSTNKLSGDLWIGFERLTKLSVSENFLSGTIQQSYFTENCILQILDLSQNSFQGVLPREIAHCKNLVTLNLWGNDLTGNIPTELGYIPNLEALYLGNNSFYRDIPDTLVNLSKLTFLDLSMNSFGGEIQNIFGRLTQVKFLLLDSNSYTGGINSSGILNLQNISRLDLSYNDFSGPLPIEISQMSSLKFLILAHNDFTGIIPPEYGFTPSLQALDLSYNRLSGPIPSSLGNLKSLLWLMLGNNSLTGEIPSELGNCSSLLWLNLENNQLSGFFPSELTNIGVTSMSTFESNRDGDHFSAGSGECLTMKRWIPADYPPFNFLDTILTRKNCRIYWESLLQGYGIFPICGGGSSIRTFQISGYIQLSGNQLTGKIPSSIGKLQNMSMLQLGTNSFYGELPPEIGQMSLVVLNISKNNFSGEIPMQIADLKCLQILDVSQNNFSGTFPTSLNNLNDLSKFNISYNPLISGVVPSTGQLVTFEKNSYFGDPLLVLPKFIDNSTNQSPNDTLPIGEPKTAKLQAGPFITLALSIFFLLCGVMCLTVCFTMKNSSKAPGYLLEDTKYEHDLEASSGSSSPSSSDNVKVIRLDRTAFTYGDILKATENFAEDRIIGKGGYGTVYKGLLPDGREIAVKKLQREGAEGEREFRAEMEVLSGNSFSWPHSNLVTLYGWCLHGSEKVLVYEYMEGGSLEDLVADRVRLTWHRRIDVAIDVARALTYLHHECYPAIVHRDVKASNVLLDKSGKARVTDFGLARVVDAGVSHVSTMVAGTVGYVAPEYGQIWHATTKGDVYSYGVLAMELATGRRALDGGEECLVDWARRVMGHGRKELRLSAMPVIVMGSGLAEGREEMSELLRIGVKCTADSPQARPNMKEVLAMLIKISNNNHSD* 1096
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte3g00429 1095 SUPERFAMILY L domain-like 571 685 - -
Pte3g00429 1095 SUPERFAMILY Protein kinase-like (PK-like) 788 1087 IPR011009 -
Pte3g00429 1095 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 252 1087 - -
Pte3g00429 1095 Gene3D Ribonuclease Inhibitor 249 322 IPR032675 -
Pte3g00429 1095 SUPERFAMILY L domain-like 188 484 - -
Pte3g00429 1095 SUPERFAMILY L domain-like 42 240 - -
Pte3g00429 1095 ProSiteProfiles Leucine-rich repeat profile. 111 132 IPR001611 GO:0005515
Pte3g00429 1095 PRINTS Leucine-rich repeat signature 418 431 - -
Pte3g00429 1095 PRINTS Leucine-rich repeat signature 206 219 - -
Pte3g00429 1095 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 243 338 - -
Pte3g00429 1095 ProSiteProfiles Protein kinase domain profile. 812 1095 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte3g00429 1095 Pfam Leucine rich repeat 226 286 IPR001611 GO:0005515
Pte3g00429 1095 Pfam Leucine rich repeat 419 479 IPR001611 GO:0005515
Pte3g00429 1095 CDD STKc_IRAK 818 1088 - -
Pte3g00429 1095 Gene3D Ribonuclease Inhibitor 39 176 IPR032675 -
Pte3g00429 1095 Gene3D Ribonuclease Inhibitor 177 248 IPR032675 -
Pte3g00429 1095 ProSitePatterns Protein kinases ATP-binding region signature. 818 841 IPR017441 GO:0005524
Pte3g00429 1095 FunFam serine/threonine-protein kinase BRI1-like 2 773 891 - -
Pte3g00429 1095 FunFam Leucine-rich repeat receptor-like protein kinase 892 1095 - -
Pte3g00429 1095 SMART LRR_typ_2 590 614 IPR003591 -
Pte3g00429 1095 SMART LRR_typ_2 442 466 IPR003591 -
Pte3g00429 1095 SMART LRR_typ_2 109 132 IPR003591 -
Pte3g00429 1095 SMART LRR_typ_2 297 321 IPR003591 -
Pte3g00429 1095 SMART LRR_typ_2 394 419 IPR003591 -
Pte3g00429 1095 Gene3D Ribonuclease Inhibitor 571 614 IPR032675 -
Pte3g00429 1095 Gene3D Ribonuclease Inhibitor 615 699 IPR032675 -
Pte3g00429 1095 FunFam Putative LRR receptor-like serine/threonine-protein kinase 345 506 - -
Pte3g00429 1095 Gene3D Ribonuclease Inhibitor 324 508 IPR032675 -
Pte3g00429 1095 ProSitePatterns Serine/Threonine protein kinases active-site signature. 934 946 IPR008271 GO:0004672|GO:0006468
Pte3g00429 1095 SMART serkin_6 812 1087 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte3g00429 1095 Pfam Protein kinase domain 813 1083 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte3g00429 1095 ProSiteProfiles Leucine-rich repeat profile. 134 155 IPR001611 GO:0005515
Pte3g00429 1095 Pfam Leucine rich repeat N-terminal domain 41 84 IPR013210 -
Pte3g00429 1095 Gene3D Phosphorylase Kinase; domain 1 776 891 - -
Pte3g00429 1095 Gene3D Transferase(Phosphotransferase) domain 1 892 1095 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte3g00429 Pte-Chr3 3504806 3508426 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte3g00429 67 1095 Receptor kinase-like Gene Family AT1G55610 31.822 2.44e-145 464
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-Xb-2 Pte3g00429 Pkinase 3.9e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte3g00429 - - qsa:O6P43_022881 1474.14